Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 RNU6-1010P-201ENST00000362757 107 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 Y_RNA.571-201ENST00000384753 98 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 SNORA40.19-201ENST00000390846 128 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 RNA5SP201-201ENST00000410316 124 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 RNA5SP475-201ENST00000410568 110 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 RPL21P10-201ENST00000463521 490 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 HMGB3P3-201ENST00000510526 400 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 RNU2-12P-201ENST00000517216 168 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 MIR548AI-201ENST00000579940 88 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 AL356274.2-201ENST00000624379 3752 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.51□□□□□ -1.85
FOXP3Q9BZS1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 SNORD56.3-201ENST00000363507 71 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 RNA5SP267-201ENST00000364893 126 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 RNU6-1264P-201ENST00000383891 107 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 Y_RNA.580-201ENST00000391004 95 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 BTF3P11-201ENST00000426582 477 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 CYCSP4-201ENST00000429682 331 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AC008155.2-201ENST00000464337 397 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 RPL30P14-201ENST00000482744 348 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AC006483.1-201ENST00000487308 313 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AC140059.1-201ENST00000489238 361 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 SUMO2P18-201ENST00000518873 252 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AC068657.1-201ENST00000520807 306 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AC107294.3-201ENST00000609211 526 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 PCGEM1.1-201ENST00000613431 131 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
FOXP3Q9BZS1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 Y_RNA.40-201ENST00000362645 93 ntBASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 RNU6-529P-201ENST00000363383 104 ntBASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 AL133475.1-201ENST00000404414 305 ntBASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 Z92545.1-201ENST00000411782 234 ntBASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 BMS1P22-201ENST00000414726 313 ntBASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 DBIP2-201ENST00000419076 262 ntBASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 MIR7851-201ENST00000610611 160 ntBASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 AC002076.2-201ENST00000617362 122 ntBASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
FOXP3Q9BZS1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 Y_RNA.7-201ENST00000362352 102 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 Y_RNA.272-201ENST00000364696 102 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 Y_RNA.329-201ENST00000365209 107 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 Y_RNA.415-201ENST00000384012 112 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 AIMP1P2-201ENST00000425294 312 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 AC010099.1-201ENST00000455434 375 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 Y_RNA.637-201ENST00000459424 114 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 RNU7-23P-201ENST00000459465 62 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 RN7SL601P-201ENST00000471221 293 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 RNU6-436P-201ENST00000516171 114 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 RNU6-344P-201ENST00000516635 111 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 AC009127.3-201ENST00000570531 403 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 AC012493.2-201ENST00000595083 291 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 AC006380.1-201ENST00000603598 186 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 MIR3651-201ENST00000630427 90 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 MTND1P7-201ENST00000632801 297 ntBASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXP3Q9BZS1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 AC103988.1-201ENST00000566382 2177 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 AC010680.1-201ENST00000590024 3590 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 RNU6-454P-201ENST00000364292 107 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 U3.40-201ENST00000408706 208 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 AL441985.1-201ENST00000457727 251 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 AC091179.1-201ENST00000461606 579 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 RPL23AP70-201ENST00000483361 460 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 SCARNA13-201ENST00000516672 275 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 EIF4A1P12-201ENST00000551910 141 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 AC011471.1-201ENST00000585766 187 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 AL137843.1-201ENST00000605078 385 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 AL138880.2-201ENST00000616214 239 ntBASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
FOXP3Q9BZS1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms