Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 AL355297.2-201ENST00000604792 129 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM55Q9BYV6 RNU6-102P-201ENST00000384485 104 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 RPL21P3-201ENST00000395517 478 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 AC092427.1-202ENST00000430569 476 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 RNU6-107P-201ENST00000516643 102 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 AP002001.1-203ENST00000534002 267 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 AC006006.1-201ENST00000603082 144 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 AC011373.1-201ENST00000607270 237 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 AC004832.5-201ENST00000608677 401 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 MIR7851-201ENST00000610611 160 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 MIR1248-201ENST00000629190 106 ntBASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM55Q9BYV6 AC008264.2-201ENST00000610193 3731 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 RNU6-545P-201ENST00000362681 104 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 Y_RNA.111-201ENST00000363248 100 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 RNU6-1180P-201ENST00000364935 107 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 RNU6-1175P-201ENST00000365200 107 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 RNU6-1264P-201ENST00000383891 107 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 MIR586-201ENST00000385035 97 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 RNU4-30P-201ENST00000410245 143 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 RNU6-1203P-201ENST00000410703 110 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 AC096920.1-201ENST00000423991 241 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 UBBP3-201ENST00000445497 241 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 RN7SL807P-201ENST00000470923 297 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 RNU6-496P-201ENST00000516145 99 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 RNU7-110P-201ENST00000516891 62 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 AL109918.3-201ENST00000603072 338 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 AC090425.1-201ENST00000610007 140 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 AC062037.2-201ENST00000610137 73 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 MIR3674-201ENST00000636576 68 ntBASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
TRIM55Q9BYV6 MIR410-201ENST00000362222 80 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 RNU6-1305P-201ENST00000364353 104 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 SNORA72.2-201ENST00000365028 127 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 RNU6-1026P-201ENST00000384465 108 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 Y_RNA.518-201ENST00000384552 113 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 SNORD17-201ENST00000390930 237 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 HMGN2P9-201ENST00000476875 229 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 RNA5SP385-201ENST00000515947 110 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 RNU6-56P-201ENST00000516986 93 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 MIR8057-201ENST00000620957 69 ntBASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM55Q9BYV6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 SNORA38.1-201ENST00000364172 131 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 SNORA51.4-201ENST00000364993 124 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 Y_RNA.541-201ENST00000384640 113 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 AL390729.2-201ENST00000416137 156 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 HSPE1P25-201ENST00000455484 251 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 SEPT14P8-201ENST00000508026 178 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 AC023157.2-201ENST00000540596 141 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 SNORD113-5-201ENST00000607261 78 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 AC004467.1-201ENST00000615678 330 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 AP001282.2-201ENST00000616149 309 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 AC091932.3-201ENST00000624223 323 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 FAM35CP-201ENST00000554755 2470 ntBASIC3.29□□□□□ -1.88
TRIM55Q9BYV6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 SNORD81.1-201ENST00000363064 77 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 U3.8-201ENST00000363675 217 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 RNU6-1310P-201ENST00000384153 107 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 RNU6-21P-201ENST00000384710 107 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 MIR300-201ENST00000401138 83 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 MIR1283-1-201ENST00000408494 87 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 Y_RNA.618-201ENST00000410949 107 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
TRIM55Q9BYV6 AC104389.3-201ENST00000445629 235 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms