Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 AC080128.1-201ENST00000474389 1917 ntBASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL25A1Q9BXS0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 Y_RNA.362-201ENST00000365518 110 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 RNU6-217P-201ENST00000384164 104 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 MIR181B1-201ENST00000385240 110 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 RNU6-279P-201ENST00000391297 101 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 AC104333.2-201ENST00000422630 192 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 AC012308.1-201ENST00000451232 178 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 RPL39P39-201ENST00000455840 151 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 RNU6-893P-201ENST00000458841 100 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 SRIP1-201ENST00000489235 288 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 PHBP14-201ENST00000512887 367 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 RNU6-113P-201ENST00000516653 101 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 AP004371.1-201ENST00000525240 214 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 AC068339.1-201ENST00000526965 141 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 AC006064.5-201ENST00000541782 248 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 AC005972.2-201ENST00000604690 348 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 AC126323.6-202ENST00000568092 3511 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 AL159152.1-201ENST00000635019 2587 ntBASIC4.04□□□□□ -1.76
COL25A1Q9BXS0 AC002543.1-201ENST00000299783 1954 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 ZNF962P-201ENST00000443465 3140 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 RNU1-63P-201ENST00000383902 164 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 MIR873-201ENST00000401120 77 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 CYCSP48-201ENST00000417124 323 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 AC003685.2-201ENST00000422795 395 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 EIF4HP2-201ENST00000424380 563 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 AC108145.1-201ENST00000503770 153 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 RNA5SP367-201ENST00000516557 118 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 YPEL5P3-201ENST00000547227 352 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 AL160290.3-201ENST00000604869 165 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 AL137067.1-201ENST00000615933 120 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 LINC00901.1-201ENST00000617252 152 ntBASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL25A1Q9BXS0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 Y_RNA.107-201ENST00000363190 121 ntBASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 AC010285.1-201ENST00000470580 392 ntBASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 RNU6-581P-201ENST00000516214 105 ntBASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 RNA5SP341-201ENST00000516261 117 ntBASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 EIF4A1P12-201ENST00000551910 141 ntBASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 AC025627.2-201ENST00000576220 160 ntBASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 AL034555.1-201ENST00000604816 211 ntBASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 MIR432-201ENST00000606207 94 ntBASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 uc_338.4-201ENST00000616635 176 ntBASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL25A1Q9BXS0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 RNY4P6-201ENST00000363667 96 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 RNU6-1276P-201ENST00000365372 104 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 SNORA18.2-201ENST00000383865 132 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 RNU6-787P-201ENST00000384032 107 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 SNORA26-201ENST00000391286 122 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 OR2AH1P-201ENST00000425717 928 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 AC073261.1-201ENST00000429409 121 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 SNORD105B-201ENST00000458770 79 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 RN7SL504P-201ENST00000494496 287 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 HMGB1P22-201ENST00000505315 124 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 IGKV3-31-201ENST00000523109 329 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 AC007751.1-201ENST00000529260 376 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 AC141557.1-201ENST00000540982 400 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms