Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SSBP3Q9BWW4 MFSD8-236ENST00000641509 4050 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP3Q9BWW4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3□□□□□ -1.93
SSBP3Q9BWW4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP3Q9BWW4 SNORD9-201ENST00000362566 104 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 SNORA71.3-201ENST00000362582 128 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 RNA5SP119-201ENST00000362715 117 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 Y_RNA.243-201ENST00000364481 109 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 RNU6-144P-201ENST00000383951 107 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 RNU6-460P-201ENST00000391158 108 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 AL606845.1-201ENST00000404881 255 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC027124.2-201ENST00000428249 105 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC004386.2-201ENST00000441858 148 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 AL357134.1-201ENST00000445848 426 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 RPS27P1-201ENST00000450552 247 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC092991.1-201ENST00000477176 376 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 CYCTP-201ENST00000504253 315 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 RN7SKP83-201ENST00000516512 178 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 RNU1-117P-201ENST00000517041 158 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC090049.2-201ENST00000550377 109 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 MIR4724-201ENST00000579485 89 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 U7.2-201ENST00000607576 63 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 PCGEM1.1-201ENST00000613431 131 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC012314.7-201ENST00000619693 93 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 AP003355.3-201ENST00000623465 114 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC068700.1-201ENST00000565862 3754 ntBASIC3□□□□□ -1.93
SSBP3Q9BWW4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3□□□□□ -1.93
SSBP3Q9BWW4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SSBP3Q9BWW4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SSBP3Q9BWW4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SSBP3Q9BWW4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 MIR367-201ENST00000362299 68 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 SNORA63.4-201ENST00000362763 126 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 RNU6-270P-201ENST00000364131 105 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 MT-TT-201ENST00000387460 66 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 AC005300.1-201ENST00000428401 373 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 CYCSP4-201ENST00000429682 331 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 AL714022.1-201ENST00000439897 151 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 AL161651.1-201ENST00000440882 223 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 RNU7-141P-201ENST00000459304 62 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 RPS29P2-201ENST00000479278 136 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 SNORA70.12-201ENST00000516084 153 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 RNA5SP76-201ENST00000516277 87 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 RNU2-58P-201ENST00000516403 183 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 MIR3690-201ENST00000580266 75 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 MIR5006-201ENST00000583027 110 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 AC073308.1-201ENST00000623696 305 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 AL136164.4-201ENST00000625013 2135 ntBASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP3Q9BWW4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 Y_RNA.43-201ENST00000362670 111 ntBASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 Y_RNA.310-201ENST00000365063 113 ntBASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 RNU6-476P-201ENST00000384726 107 ntBASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 RNU2-37P-201ENST00000410695 177 ntBASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 AL441985.1-201ENST00000457727 251 ntBASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 AC024220.1-201ENST00000603675 484 ntBASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 AL670379.2-201ENST00000604983 252 ntBASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SSBP3Q9BWW4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 AC007656.2-201ENST00000624902 4547 ntBASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 U3.9-201ENST00000363823 204 ntBASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 Y_RNA.229-201ENST00000364347 113 ntBASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 RNU6-768P-201ENST00000384683 107 ntBASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 RNU6-19P-201ENST00000384718 107 ntBASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 RNY4P18-201ENST00000391107 89 ntBASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 HSPE1P26-201ENST00000405341 275 ntBASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 RNU6-588P-201ENST00000410281 105 ntBASIC2.97□□□□□ -1.93
SSBP3Q9BWW4 RNA5SP201-201ENST00000410316 124 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms