Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.87□□□□□ -1.95
SMOQ99835 SNORD109B-201ENST00000458961 67 ntBASIC2.87□□□□□ -1.95
SMOQ99835 SNORD109A-201ENST00000459128 67 ntBASIC2.87□□□□□ -1.95
SMOQ99835 RPL26P26-201ENST00000480251 434 ntBASIC2.87□□□□□ -1.95
SMOQ99835 Y_RNA.713-201ENST00000517013 96 ntBASIC2.87□□□□□ -1.95
SMOQ99835 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.87□□□□□ -1.95
SMOQ99835 AC010999.1-201ENST00000611856 324 ntBASIC2.87□□□□□ -1.95
SMOQ99835 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SMOQ99835 LINC02555-201ENST00000563933 1951 ntBASIC2.87□□□□□ -1.95
SMOQ99835 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMOQ99835 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMOQ99835 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
SMOQ99835 RNU6-1083P-201ENST00000384022 107 ntBASIC2.86□□□□□ -1.95
SMOQ99835 SNORA46.1-201ENST00000391069 153 ntBASIC2.86□□□□□ -1.95
SMOQ99835 RNU2-38P-201ENST00000410856 79 ntBASIC2.86□□□□□ -1.95
SMOQ99835 RN7SKP284-201ENST00000411002 343 ntBASIC2.86□□□□□ -1.95
SMOQ99835 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.86□□□□□ -1.95
SMOQ99835 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.86□□□□□ -1.95
SMOQ99835 AC103810.1-201ENST00000579873 453 ntBASIC2.86□□□□□ -1.95
SMOQ99835 MIR3605-201ENST00000583214 100 ntBASIC2.86□□□□□ -1.95
SMOQ99835 MZT1P2-201ENST00000604387 248 ntBASIC2.86□□□□□ -1.95
SMOQ99835 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.86□□□□□ -1.95
SMOQ99835 AC010615.1-201ENST00000594254 1764 ntBASIC2.86□□□□□ -1.95
SMOQ99835 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMOQ99835 AC009487.2-201ENST00000420969 6821 ntBASIC2.85□□□□□ -1.95
SMOQ99835 MAPK10-266ENST00000641066 6555 ntBASIC2.85□□□□□ -1.95
SMOQ99835 Y_RNA.84-201ENST00000363011 104 ntBASIC2.85□□□□□ -1.95
SMOQ99835 SNORA12-201ENST00000391162 147 ntBASIC2.85□□□□□ -1.95
SMOQ99835 AL512633.1-201ENST00000399931 655 ntBASIC2.85□□□□□ -1.95
SMOQ99835 RNU2-25P-201ENST00000411041 191 ntBASIC2.85□□□□□ -1.95
SMOQ99835 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.85□□□□□ -1.95
SMOQ99835 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.85□□□□□ -1.95
SMOQ99835 AL109933.2-201ENST00000452651 260 ntBASIC2.85□□□□□ -1.95
SMOQ99835 SNORD127-201ENST00000458892 86 ntBASIC2.85□□□□□ -1.95
SMOQ99835 RNU6-1132P-201ENST00000459214 107 ntBASIC2.85□□□□□ -1.95
SMOQ99835 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.85□□□□□ -1.95
SMOQ99835 TRBVB-201ENST00000477100 408 ntBASIC2.85□□□□□ -1.95
SMOQ99835 Y_RNA.680-201ENST00000516441 93 ntBASIC2.85□□□□□ -1.95
SMOQ99835 SCARNA11.3-201ENST00000517276 130 ntBASIC2.85□□□□□ -1.95
SMOQ99835 DEFB131C-201ENST00000528817 165 ntBASIC2.85□□□□□ -1.95
SMOQ99835 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.85□□□□□ -1.95
SMOQ99835 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.85□□□□□ -1.95
SMOQ99835 MIR4506-201ENST00000584693 77 ntBASIC2.85□□□□□ -1.95
SMOQ99835 RPL30P11-203ENST00000598995 310 ntBASIC2.85□□□□□ -1.95
SMOQ99835 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.85□□□□□ -1.95
SMOQ99835 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.85□□□□□ -1.95
SMOQ99835 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.85□□□□□ -1.95
SMOQ99835 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SMOQ99835 RNU6-961P-201ENST00000363893 105 ntBASIC2.84□□□□□ -1.95
SMOQ99835 RNU6-102P-201ENST00000384485 104 ntBASIC2.84□□□□□ -1.95
SMOQ99835 MIR1289-1-201ENST00000408836 144 ntBASIC2.84□□□□□ -1.95
SMOQ99835 RNU6-1203P-201ENST00000410703 110 ntBASIC2.84□□□□□ -1.95
SMOQ99835 RNA5SP184-201ENST00000411071 108 ntBASIC2.84□□□□□ -1.95
SMOQ99835 AC004866.1-201ENST00000411748 78 ntBASIC2.84□□□□□ -1.95
SMOQ99835 AC063976.3-201ENST00000426849 329 ntBASIC2.84□□□□□ -1.95
SMOQ99835 AC005002.2-201ENST00000438228 269 ntBASIC2.84□□□□□ -1.95
SMOQ99835 AC091179.3-201ENST00000474761 144 ntBASIC2.84□□□□□ -1.95
SMOQ99835 RN7SL429P-201ENST00000479090 223 ntBASIC2.84□□□□□ -1.95
SMOQ99835 RN7SL489P-201ENST00000486185 223 ntBASIC2.84□□□□□ -1.95
SMOQ99835 RN7SL327P-201ENST00000488659 223 ntBASIC2.84□□□□□ -1.95
SMOQ99835 SNORA40.9-201ENST00000515895 93 ntBASIC2.84□□□□□ -1.95
SMOQ99835 RNA5SP112-201ENST00000515937 99 ntBASIC2.84□□□□□ -1.95
SMOQ99835 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.84□□□□□ -1.95
SMOQ99835 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.84□□□□□ -1.95
SMOQ99835 RRN3P3-201ENST00000549207 578 ntBASIC2.84□□□□□ -1.95
SMOQ99835 EIF4A1P12-201ENST00000551910 141 ntBASIC2.84□□□□□ -1.95
SMOQ99835 AL356575.1-201ENST00000603008 283 ntBASIC2.84□□□□□ -1.95
SMOQ99835 AC090425.1-201ENST00000610007 140 ntBASIC2.84□□□□□ -1.95
SMOQ99835 AP001282.2-201ENST00000616149 309 ntBASIC2.84□□□□□ -1.95
SMOQ99835 RN7SL853P-201ENST00000617250 223 ntBASIC2.84□□□□□ -1.95
SMOQ99835 MIR7515-201ENST00000637837 67 ntBASIC2.84□□□□□ -1.95
SMOQ99835 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.84□□□□□ -1.95
SMOQ99835 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
SMOQ99835 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.96
SMOQ99835 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMOQ99835 AC069528.2-201ENST00000624849 1991 ntBASIC2.83□□□□□ -1.96
SMOQ99835 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.83□□□□□ -1.96
SMOQ99835 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMOQ99835 MTND5P35-201ENST00000557537 1720 ntBASIC2.83□□□□□ -1.96
SMOQ99835 Y_RNA.14-201ENST00000362415 103 ntBASIC2.83□□□□□ -1.96
SMOQ99835 U3.9-201ENST00000363823 204 ntBASIC2.83□□□□□ -1.96
SMOQ99835 Y_RNA.179-201ENST00000363844 90 ntBASIC2.83□□□□□ -1.96
SMOQ99835 RNU6-245P-201ENST00000384020 107 ntBASIC2.83□□□□□ -1.96
SMOQ99835 Y_RNA.447-201ENST00000384184 113 ntBASIC2.83□□□□□ -1.96
SMOQ99835 Y_RNA.518-201ENST00000384552 113 ntBASIC2.83□□□□□ -1.96
SMOQ99835 Y_RNA.595-201ENST00000410403 105 ntBASIC2.83□□□□□ -1.96
SMOQ99835 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.83□□□□□ -1.96
SMOQ99835 AC244505.4-201ENST00000434905 287 ntBASIC2.83□□□□□ -1.96
SMOQ99835 SSXP5-201ENST00000443473 287 ntBASIC2.83□□□□□ -1.96
SMOQ99835 RPS29P12-201ENST00000460178 152 ntBASIC2.83□□□□□ -1.96
SMOQ99835 MTND1P19-201ENST00000511780 315 ntBASIC2.83□□□□□ -1.96
SMOQ99835 SNORA9.3-201ENST00000516383 129 ntBASIC2.83□□□□□ -1.96
SMOQ99835 Y_RNA.683-201ENST00000516508 93 ntBASIC2.83□□□□□ -1.96
SMOQ99835 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.83□□□□□ -1.96
SMOQ99835 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
SMOQ99835 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.83□□□□□ -1.96
SMOQ99835 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.83□□□□□ -1.96
SMOQ99835 AC006023.1-201ENST00000603944 259 ntBASIC2.83□□□□□ -1.96
SMOQ99835 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.83□□□□□ -1.96
SMOQ99835 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms