Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-679P-201ENST00000391003 106 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AL592447.1-201ENST00000447592 540 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.58□□□□□ -2.5
COL12A1Q99715 RNU7-129P-201ENST00000516128 62 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC100767.1-201ENST00000528178 123 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC018926.3-201ENST00000618841 406 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 MIR6514-201ENST00000622549 70 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 MTND5P31-201ENST00000419366 1374 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 MIR148A-201ENST00000362215 68 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 PCNPP3-201ENST00000393579 471 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AL133264.1-201ENST00000407157 562 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 MTND2P5-201ENST00000432656 1006 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AL008629.1-201ENST00000438615 184 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC003071.1-201ENST00000451219 789 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC073968.1-201ENST00000618594 637 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC015726.2-201ENST00000620112 122 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC083799.1-201ENST00000366451 910 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 SNORA70.12-201ENST00000516084 153 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 AP001981.2-201ENST00000603241 418 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 AC106754.1-201ENST00000562632 1513 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 AC092104.1-201ENST00000497346 1441 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 ZNF849P-201ENST00000594711 1566 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 RNU6-505P-201ENST00000384427 107 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 MIR454-201ENST00000390180 115 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.59□□□□□ -2.5
COL12A1Q99715 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.59□□□□□ -2.5
COL12A1Q99715 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.59□□□□□ -2.5
COL12A1Q99715 AC027338.1-201ENST00000514840 825 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.59□□□□□ -2.5
COL12A1Q99715 MIR3976-201ENST00000606807 139 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 AP002360.4-201ENST00000606980 481 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 SNORA25.18-201ENST00000607153 114 ntBASIC-0.59□□□□□ -2.5
COL12A1Q99715 SNORD115-28-201ENST00000363931 81 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 RNU6-331P-201ENST00000384724 107 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 FCF1P9-201ENST00000412546 282 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 AC074133.1-201ENST00000515696 183 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 AC109446.1-201ENST00000566172 220 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 YWHAEP3-201ENST00000582767 121 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.6□□□□□ -2.51
COL12A1Q99715 AC098483.2-201ENST00000603158 454 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 AC011458.1-201ENST00000604034 617 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.6□□□□□ -2.51
COL12A1Q99715 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 SNORD18.1-201ENST00000363807 70 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 SNORD82-201ENST00000365530 70 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 RNU6-83P-201ENST00000384568 112 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 RNA5SP163-201ENST00000410304 99 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 SNRPEP8-201ENST00000442866 260 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 RNU6-922P-201ENST00000516753 99 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 AC124947.2-202ENST00000552735 133 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.6□□□□□ -2.51
COL12A1Q99715 AL442163.3-201ENST00000554110 156 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 AC091135.1-201ENST00000585943 307 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 AC018926.1-201ENST00000616335 435 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 AL109620.1-201ENST00000618738 1197 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 MTND4P8-201ENST00000514997 1362 ntBASIC-0.6□□□□□ -2.51
COL12A1Q99715 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 RNU6-553P-201ENST00000364047 96 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 SNORA26-201ENST00000391286 122 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 USP9YP13-201ENST00000417797 480 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 AL606517.2-201ENST00000442855 241 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.61□□□□□ -2.51
COL12A1Q99715 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
COL12A1Q99715 AC093850.1-201ENST00000454121 251 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.61□□□□□ -2.51
COL12A1Q99715 AP000763.2-201ENST00000540641 163 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
COL12A1Q99715 AC004223.4-201ENST00000612426 332 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 AC009318.4-201ENST00000620496 486 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 MIR382-201ENST00000637119 76 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 RNU2-33P-201ENST00000410344 192 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.61□□□□□ -2.51
COL12A1Q99715 AL031779.1-201ENST00000415663 330 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 MTCO1P5-201ENST00000433573 344 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.61□□□□□ -2.51
COL12A1Q99715 AL390208.1-201ENST00000605885 644 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 AC016542.1-201ENST00000608259 493 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 MIR499B-201ENST00000636498 73 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 RNU6-819P-201ENST00000364116 107 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 MIR520A-201ENST00000384862 85 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 MIR573-201ENST00000384964 99 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 MIR487A-201ENST00000385009 80 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 RNU6-994P-201ENST00000410507 111 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 RNU6-947P-201ENST00000516264 106 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 RNU6-180P-201ENST00000516697 61 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 SNORD60.2-201ENST00000516883 86 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 MIR4709-201ENST00000577272 72 ntBASIC-0.61□□□□□ -2.51
COL12A1Q99715 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms