Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC005002.2-201ENST00000438228 269 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.22□□□□□ -2.37
LYSMD1Q96S90 RPL39P39-201ENST00000455840 151 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AC016550.1-201ENST00000505348 785 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.22□□□□□ -2.37
LYSMD1Q96S90 RNU6-567P-201ENST00000516746 107 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AC023050.3-201ENST00000541142 333 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AC025627.3-201ENST00000582078 182 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AC104458.1-201ENST00000608243 463 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AL513423.1-201ENST00000621695 132 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AL450472.1-202ENST00000637286 180 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 RNU6-179P-201ENST00000363350 107 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 SNORD116-13-201ENST00000384408 92 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 RNY1P4-201ENST00000384595 115 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 MIR558-201ENST00000384920 94 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 SNORA16.2-201ENST00000390991 127 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 RNU2-8P-201ENST00000410727 190 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.21□□□□□ -2.38
LYSMD1Q96S90 MED13P1-201ENST00000428342 171 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AC245047.3-201ENST00000429428 127 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AL133396.1-201ENST00000432048 687 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 SNAP23P1-201ENST00000433229 246 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.21□□□□□ -2.38
LYSMD1Q96S90 NFU1P2-201ENST00000448700 469 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 snoU13.6-201ENST00000458785 104 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AC010486.2-201ENST00000505572 483 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AK3P2-201ENST00000507976 429 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 RN7SKP12-201ENST00000516275 143 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AP003181.2-201ENST00000528941 181 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.21□□□□□ -2.38
LYSMD1Q96S90 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AC146944.4-201ENST00000602697 718 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AL390123.1-201ENST00000603216 237 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AC022217.4-201ENST00000604389 163 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AL356157.2-201ENST00000605122 111 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 AC093913.1-201ENST00000614178 329 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 MIR8054-201ENST00000620877 86 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 7SK.10-201ENST00000621414 298 ntBASIC0.21□□□□□ -2.38
LYSMD1Q96S90 Y_RNA.302-201ENST00000364997 102 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
LYSMD1Q96S90 Y_RNA.576-201ENST00000384781 102 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 MIR653-201ENST00000385279 96 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 AL451046.2-201ENST00000403074 277 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 RNU2-70P-201ENST00000410718 179 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 AL049830.1-201ENST00000468034 425 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.2□□□□□ -2.38
LYSMD1Q96S90 AC079382.1-201ENST00000493346 557 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.2□□□□□ -2.38
LYSMD1Q96S90 RNU6-948P-201ENST00000516374 107 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 RNU6-1178P-201ENST00000516674 107 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 RNU1-142P-201ENST00000516682 145 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 RNU6-685P-201ENST00000517088 95 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 AC103996.1-201ENST00000555468 102 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 AL357312.1-201ENST00000603879 298 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.2□□□□□ -2.38
LYSMD1Q96S90 AL445984.1-201ENST00000637834 659 ntBASIC0.2□□□□□ -2.38
LYSMD1Q96S90 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.19□□□□□ -2.38
LYSMD1Q96S90 Y_RNA.22-201ENST00000362492 102 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RNU6-562P-201ENST00000362731 107 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RNU6-199P-201ENST00000362954 107 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RNU4-1-201ENST00000363925 141 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RNU6-660P-201ENST00000364566 109 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 SNORA36.2-201ENST00000384004 127 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RNU6-533P-201ENST00000384144 107 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RNU6-348P-201ENST00000384386 107 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RNU6-163P-201ENST00000384396 106 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 MIR660-201ENST00000385235 97 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RNU6-440P-201ENST00000390882 105 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 SNORD89-201ENST00000390981 114 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RNU6-57P-201ENST00000411348 103 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 CDK8P2-201ENST00000415020 547 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.19□□□□□ -2.38
LYSMD1Q96S90 RPL37P21-201ENST00000435890 276 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 AC022493.2-201ENST00000506122 481 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 AP003072.2-201ENST00000527756 676 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 SUB1P2-201ENST00000556401 297 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.19□□□□□ -2.38
LYSMD1Q96S90 MIR5006-201ENST00000583027 110 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 AL121992.2-201ENST00000606262 256 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 AC064807.4-201ENST00000607201 407 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 AC073349.3-201ENST00000617616 186 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 AL607023.1-201ENST00000620045 248 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 MTND4P5-201ENST00000435821 1374 ntBASIC0.19□□□□□ -2.38
LYSMD1Q96S90 AP000568.1-201ENST00000282964 442 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 RNU6-715P-201ENST00000365204 103 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 Y_RNA.330-201ENST00000365230 109 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 RNU6-827P-201ENST00000365553 106 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 RNU6-975P-201ENST00000384296 105 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 SNORA12.1-201ENST00000390873 148 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 RNU1-119P-201ENST00000391122 165 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 MRPL42P2-201ENST00000403169 426 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AL034345.1-201ENST00000407768 123 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms