Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RNA5SP54-201ENST00000516951 92 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.7□□□□□ -2.14
RAB40CQ96S21 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40CQ96S21 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40CQ96S21 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.7□□□□□ -2.14
RAB40CQ96S21 MIR4448-201ENST00000584360 86 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 MIR4753-201ENST00000585119 83 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 AL158827.2-201ENST00000602494 330 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 AC018462.2-201ENST00000605375 395 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 AL359697.1-201ENST00000624879 587 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 AL691447.3-201ENST00000635020 330 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.7□□□□□ -2.14
RAB40CQ96S21 ZNF299P-201ENST00000406845 1804 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RAB40CQ96S21 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.69□□□□□ -2.14
RAB40CQ96S21 MIR449A-201ENST00000362113 91 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 RNA5SP289-201ENST00000362332 137 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 SNORD115-8-201ENST00000363856 82 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 RNU6-593P-201ENST00000364716 112 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 SNORD115-38-201ENST00000365037 82 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 Y_RNA.319-201ENST00000365138 92 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40CQ96S21 FGF7P8-201ENST00000402994 292 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 RPL21P111-201ENST00000418453 477 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.69□□□□□ -2.14
RAB40CQ96S21 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40CQ96S21 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40CQ96S21 RPL30P10-201ENST00000488148 337 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 RPL23AP94-201ENST00000512518 302 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 GNAI2P1-201ENST00000541815 315 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40CQ96S21 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40CQ96S21 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.69□□□□□ -2.14
RAB40CQ96S21 AC011494.1-201ENST00000596454 237 ntBASIC1.69□□□□□ -2.14
RAB40CQ96S21 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
RAB40CQ96S21 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RAB40CQ96S21 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
RAB40CQ96S21 RNU4-82P-201ENST00000362443 140 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 RNU6-845P-201ENST00000362578 103 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 Y_RNA.184-201ENST00000363884 108 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 Y_RNA.473-201ENST00000384333 102 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 RNU6-601P-201ENST00000384540 107 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 RNU6-541P-201ENST00000384709 110 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 SUMO2P12-201ENST00000405924 140 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 RPL37P10-201ENST00000412884 288 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RAB40CQ96S21 MTCO1P44-201ENST00000441935 243 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.68□□□□□ -2.14
RAB40CQ96S21 RN7SKP210-201ENST00000459176 261 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 RN7SL274P-201ENST00000492268 272 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.68□□□□□ -2.14
RAB40CQ96S21 AC026782.1-201ENST00000512952 449 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.68□□□□□ -2.14
RAB40CQ96S21 RNU6-1198P-201ENST00000516904 67 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.68□□□□□ -2.14
RAB40CQ96S21 AL590705.4-201ENST00000532209 134 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 RRN3P3-201ENST00000549207 578 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 AC027288.2-201ENST00000553028 243 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.68□□□□□ -2.14
RAB40CQ96S21 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.68□□□□□ -2.14
RAB40CQ96S21 AC005786.1-201ENST00000588553 154 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 uc_338.5-201ENST00000611839 155 ntBASIC1.68□□□□□ -2.14
RAB40CQ96S21 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RAB40CQ96S21 Y_RNA.48-201ENST00000362710 103 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 RNU6-595P-201ENST00000363944 107 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 Y_RNA.339-201ENST00000365325 102 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 RNU6-418P-201ENST00000384035 107 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 RNU6-17P-201ENST00000384245 107 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 RNU6-18P-201ENST00000384527 107 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 Y_RNA.594-201ENST00000410373 140 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 RNU4-53P-201ENST00000410828 140 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 HMGB1P18-201ENST00000438801 619 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 AL357134.1-201ENST00000445848 426 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.67□□□□□ -2.14
RAB40CQ96S21 HMGB3P17-201ENST00000504195 649 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 AC008413.1-201ENST00000511864 177 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 RNU7-175P-201ENST00000515915 61 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 RNVU1-2-201ENST00000516326 135 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 RNU6-58P-201ENST00000517143 103 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 CBX3P8-201ENST00000532412 525 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.67□□□□□ -2.14
RAB40CQ96S21 AC083806.3-201ENST00000614016 455 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 uc_338.20-201ENST00000621563 178 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RAB40CQ96S21 AC245060.5-201ENST00000610778 3293 ntBASIC1.67□□□□□ -2.14
RAB40CQ96S21 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
RAB40CQ96S21 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
RAB40CQ96S21 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
RAB40CQ96S21 Y_RNA.2-201ENST00000362330 96 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 Y_RNA.88-201ENST00000363029 99 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 Y_RNA.166-201ENST00000363730 102 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 RNU6-245P-201ENST00000384020 107 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 Y_RNA.490-201ENST00000384413 102 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 RNU6-1050P-201ENST00000410388 107 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 AL135786.1-201ENST00000415892 214 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.66□□□□□ -2.14
RAB40CQ96S21 MTCO3P29-201ENST00000432119 779 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 AL445305.1-201ENST00000432577 575 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms