Protein–RNA interactions for Protein: Q96KP6

TNIP3, TNFAIP3-interacting protein 3, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3Q96KP6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
TNIP3Q96KP6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
TNIP3Q96KP6 MIR10B-201ENST00000385011 110 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 MIR29C-201ENST00000385231 88 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.61□□□□□ -1.99
TNIP3Q96KP6 AC123900.1-201ENST00000420390 96 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.61□□□□□ -1.99
TNIP3Q96KP6 USP9YP16-201ENST00000430287 407 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.61□□□□□ -1.99
TNIP3Q96KP6 USP9YP23-201ENST00000455085 407 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 AC016925.1-201ENST00000458303 298 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 RNU7-152P-201ENST00000458982 64 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 RNU7-87P-201ENST00000459343 62 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.61□□□□□ -1.99
TNIP3Q96KP6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.61□□□□□ -1.99
TNIP3Q96KP6 SUB1P3-201ENST00000564581 315 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 AC013412.1-201ENST00000610687 192 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 MIR1244-1-201ENST00000612829 85 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.61□□□□□ -1.99
TNIP3Q96KP6 AC126177.8-201ENST00000618339 1015 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 AL359697.1-201ENST00000624879 587 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 MIR1244-3-201ENST00000635744 85 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 MIR1244-2-201ENST00000636449 85 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 MIR1244-4-202ENST00000636813 85 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 MTND5P16-201ENST00000460269 1703 ntBASIC2.61□□□□□ -1.99
TNIP3Q96KP6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TNIP3Q96KP6 MIR449A-201ENST00000362113 91 ntBASIC2.6□□□□□ -1.99
TNIP3Q96KP6 RNU6-280P-201ENST00000364145 104 ntBASIC2.6□□□□□ -1.99
TNIP3Q96KP6 SNORD23.1-201ENST00000408212 104 ntBASIC2.6□□□□□ -1.99
TNIP3Q96KP6 AC022028.1-201ENST00000412054 408 ntBASIC2.6□□□□□ -1.99
TNIP3Q96KP6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.6□□□□□ -1.99
TNIP3Q96KP6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.6□□□□□ -1.99
TNIP3Q96KP6 RNA5SP24-201ENST00000516478 95 ntBASIC2.6□□□□□ -1.99
TNIP3Q96KP6 RRN3P3-201ENST00000549207 578 ntBASIC2.6□□□□□ -1.99
TNIP3Q96KP6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.6□□□□□ -1.99
TNIP3Q96KP6 AC012640.5-201ENST00000623897 319 ntBASIC2.6□□□□□ -1.99
TNIP3Q96KP6 IGHVIII-44-202ENST00000636235 289 ntBASIC2.6□□□□□ -1.99
TNIP3Q96KP6 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
TNIP3Q96KP6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TNIP3Q96KP6 RNU4-82P-201ENST00000362443 140 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 Y_RNA.187-201ENST00000363918 113 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 Y_RNA.364-201ENST00000365532 101 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 Y_RNA.577-201ENST00000384794 101 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 MIR518A2-201ENST00000384966 87 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 SNORA40.19-201ENST00000390846 128 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 RNU1-139P-201ENST00000391307 165 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 MIR300-201ENST00000401138 83 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.59□□□□□ -1.99
TNIP3Q96KP6 OOSP1P1-201ENST00000423265 274 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.59□□□□□ -1.99
TNIP3Q96KP6 RNU6-1114P-201ENST00000516022 107 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 AC087441.2-201ENST00000529141 262 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.59□□□□□ -1.99
TNIP3Q96KP6 MIR5695-201ENST00000579717 85 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 C8orf59P2-201ENST00000603441 271 ntBASIC2.59□□□□□ -1.99
TNIP3Q96KP6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -1.99
TNIP3Q96KP6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TNIP3Q96KP6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.59□□□□□ -2
TNIP3Q96KP6 MTND5P10-201ENST00000603719 1809 ntBASIC2.58□□□□□ -2
TNIP3Q96KP6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TNIP3Q96KP6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.58□□□□□ -2
TNIP3Q96KP6 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
TNIP3Q96KP6 MIR1283-1-201ENST00000408494 87 ntBASIC2.58□□□□□ -2
TNIP3Q96KP6 RNU6-1156P-201ENST00000410365 100 ntBASIC2.58□□□□□ -2
TNIP3Q96KP6 AF228730.4-201ENST00000421457 183 ntBASIC2.58□□□□□ -2
TNIP3Q96KP6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.58□□□□□ -2
TNIP3Q96KP6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.58□□□□□ -2
TNIP3Q96KP6 RNU6-344P-201ENST00000516635 111 ntBASIC2.58□□□□□ -2
TNIP3Q96KP6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.58□□□□□ -2
TNIP3Q96KP6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.58□□□□□ -2
TNIP3Q96KP6 AC104985.2-201ENST00000620598 500 ntBASIC2.58□□□□□ -2
TNIP3Q96KP6 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
TNIP3Q96KP6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.58□□□□□ -2
TNIP3Q96KP6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.58□□□□□ -2
TNIP3Q96KP6 Y_RNA.132-201ENST00000363421 102 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 RNU6-1040P-201ENST00000383974 107 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.57□□□□□ -2
TNIP3Q96KP6 AC009963.1-201ENST00000417265 157 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 BX510359.4-201ENST00000423750 193 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 AC007395.1-201ENST00000451333 677 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.57□□□□□ -2
TNIP3Q96KP6 AC234781.5-201ENST00000508429 271 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.57□□□□□ -2
TNIP3Q96KP6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.57□□□□□ -2
TNIP3Q96KP6 MYL12BP1-201ENST00000569826 507 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 AC090617.3-201ENST00000573670 475 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 MIR4435-1-201ENST00000582552 80 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 MIR4753-201ENST00000585119 83 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 MIR6895-201ENST00000613497 78 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 AC005296.1-201ENST00000616145 209 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 AC016717.2-201ENST00000609089 5141 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 LINC02555-201ENST00000563933 1951 ntBASIC2.57□□□□□ -2
TNIP3Q96KP6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
TNIP3Q96KP6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TNIP3Q96KP6 AP006437.1-201ENST00000641440 3685 ntBASIC2.56□□□□□ -2
TNIP3Q96KP6 MIR340-201ENST00000362125 95 ntBASIC2.56□□□□□ -2
TNIP3Q96KP6 RNU1-62P-201ENST00000362599 164 ntBASIC2.56□□□□□ -2
TNIP3Q96KP6 Y_RNA.146-201ENST00000363549 102 ntBASIC2.56□□□□□ -2
TNIP3Q96KP6 RNU5F-3P-201ENST00000363767 117 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms