Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 RNU1-40P-201ENST00000516816 164 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 RNU1-97P-201ENST00000516872 164 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 AL590705.4-201ENST00000532209 134 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 AC027288.2-201ENST00000553028 243 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 AC026470.2-201ENST00000561492 181 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 UBE2V2P2-201ENST00000587677 504 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 AC005296.1-201ENST00000616145 209 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC136Q96JN2 AL359851.1-201ENST00000569460 4997 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 RNA5SP276-201ENST00000362580 94 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 Y_RNA.142-201ENST00000363491 102 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 Y_RNA.474-201ENST00000384341 102 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 RNU11-3P-201ENST00000391111 133 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 SNORA75.4-201ENST00000391278 119 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 RNU6-370P-201ENST00000411008 104 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 AC123900.1-201ENST00000420390 96 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 AC096920.1-201ENST00000423991 241 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 RNU6-58P-201ENST00000517143 103 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC136Q96JN2 UBL5P4-201ENST00000562584 236 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC136Q96JN2 MIR548S-201ENST00000581352 82 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 AC008749.1-201ENST00000597650 306 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 RPL17P51-201ENST00000605218 238 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 PISRT1.1-201ENST00000616930 107 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 AL669831.3-213ENST00000636676 183 ntBASIC2.75□□□□□ -1.97
CCDC136Q96JN2 RNU1-58P-201ENST00000362413 163 ntBASIC2.74□□□□□ -1.97
CCDC136Q96JN2 XGY1-201ENST00000381172 446 ntBASIC2.74□□□□□ -1.97
CCDC136Q96JN2 RNU6-160P-201ENST00000384591 107 ntBASIC2.74□□□□□ -1.97
CCDC136Q96JN2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC136Q96JN2 AC016925.1-201ENST00000458303 298 ntBASIC2.74□□□□□ -1.97
CCDC136Q96JN2 AC091951.2-201ENST00000500762 203 ntBASIC2.74□□□□□ -1.97
CCDC136Q96JN2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC136Q96JN2 SCARNA16.2-201ENST00000516520 172 ntBASIC2.74□□□□□ -1.97
CCDC136Q96JN2 AL355802.3-201ENST00000607571 545 ntBASIC2.74□□□□□ -1.97
CCDC136Q96JN2 AC130454.1-201ENST00000622948 401 ntBASIC2.74□□□□□ -1.97
CCDC136Q96JN2 LINC02555-201ENST00000563933 1951 ntBASIC2.74□□□□□ -1.97
CCDC136Q96JN2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC136Q96JN2 BX322639.1-202ENST00000423987 2213 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 RNU6-23P-201ENST00000363283 107 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 RNA5SP493-201ENST00000364115 91 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC136Q96JN2 RNU6-17P-201ENST00000384245 107 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 RNY3P14-201ENST00000384309 102 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 RNU6-18P-201ENST00000384527 107 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC136Q96JN2 AP000870.1-201ENST00000472927 406 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 RPL23AP94-201ENST00000512518 302 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 RNU7-175P-201ENST00000515915 61 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 RNU6-507P-201ENST00000516045 100 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC136Q96JN2 7SK.7-201ENST00000603504 247 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 SNRPGP20-201ENST00000604477 205 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC136Q96JN2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC136Q96JN2 AC245060.5-201ENST00000610778 3293 ntBASIC2.73□□□□□ -1.97
CCDC136Q96JN2 RNA5SP289-201ENST00000362332 137 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 RNU6-222P-201ENST00000362438 107 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 RNU6-541P-201ENST00000384709 110 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 SNORA48.3-201ENST00000391081 134 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 USMG5P1-201ENST00000425964 177 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 MTND4P18-201ENST00000447010 465 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 AC009237.7-201ENST00000447357 229 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 RN7SKP210-201ENST00000459176 261 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 AC010531.2-201ENST00000465012 153 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 MIR4513-201ENST00000581077 86 ntBASIC2.72□□□□□ -1.97
CCDC136Q96JN2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.97
CCDC136Q96JN2 ZNF658B-202ENST00000615961 3375 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC136Q96JN2 RNU6-873P-201ENST00000363833 107 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 SNORD115-8-201ENST00000363856 82 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 SNORD115-38-201ENST00000365037 82 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CCDC136Q96JN2 MIR1283-1-201ENST00000408494 87 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 RNA5SP200-201ENST00000516360 103 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 RNU1-117P-201ENST00000517041 158 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC136Q96JN2 APOOP3-201ENST00000536787 586 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 RRN3P3-201ENST00000549207 578 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 MIR3169-201ENST00000578032 83 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 AC098657.3-201ENST00000620434 263 ntBASIC2.71□□□□□ -1.98
CCDC136Q96JN2 ZNF702P-202ENST00000434269 1966 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CCDC136Q96JN2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC136Q96JN2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC136Q96JN2 RNY1P16-201ENST00000363063 111 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 RNU6-418P-201ENST00000384035 107 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 Y_RNA.490-201ENST00000384413 102 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 RNA5SP465-201ENST00000391195 109 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 NCOR1P3-201ENST00000420479 303 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC136Q96JN2 MTND3P23-201ENST00000431980 347 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 RPL23AP3-201ENST00000453844 468 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 RNU6-120P-201ENST00000516077 103 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 SNORA25.14-201ENST00000516481 132 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 RNU6-875P-201ENST00000516488 106 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 RNA5SP54-201ENST00000516951 92 ntBASIC2.7□□□□□ -1.98
CCDC136Q96JN2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms