Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 OR9P1P-201ENST00000496431 281 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 MIR548AD-201ENST00000584780 82 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 AC010525.2-201ENST00000590920 195 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 AL355598.1-201ENST00000604169 202 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 AC004853.1-201ENST00000604902 698 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
SPG11Q96JI7 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 MIR660-201ENST00000385235 97 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AL136310.1-201ENST00000404926 654 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AL663109.1-201ENST00000411498 844 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 USP9YP11-201ENST00000427537 717 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AL606517.1-201ENST00000446914 387 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AC091959.1-201ENST00000495857 238 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AC093012.1-202ENST00000549403 582 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 TPRKBP2-201ENST00000565969 475 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AC122134.1-202ENST00000569111 1201 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AC023827.1-201ENST00000569247 97 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AC100830.2-201ENST00000581636 240 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AC006441.5-201ENST00000612680 209 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.5□□□□□ -2.49
SPG11Q96JI7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AL162726.3-218ENST00000636401 95 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 ZNF849P-201ENST00000594711 1566 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.5□□□□□ -2.49
SPG11Q96JI7 CCDC58P2-201ENST00000417131 366 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.5□□□□□ -2.49
SPG11Q96JI7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.5□□□□□ -2.49
SPG11Q96JI7 SNRPEP8-201ENST00000442866 260 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 MTND3P4-201ENST00000453537 303 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 AL390208.1-201ENST00000605885 644 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.5□□□□□ -2.49
SPG11Q96JI7 U6.101-201ENST00000637707 76 ntBASIC-0.5□□□□□ -2.49
SPG11Q96JI7 MTND4P4-201ENST00000439033 1366 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 RNU6-743P-201ENST00000364151 106 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 SNORA8.2-201ENST00000384372 139 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 AL139396.1-201ENST00000421137 167 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 HLA-S-202ENST00000425174 53 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 RPL17P19-201ENST00000489069 552 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 RNU6-703P-201ENST00000516946 107 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 LRRC6P1-201ENST00000532188 885 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 AP001429.1-201ENST00000602568 530 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 AL359075.3-201ENST00000613288 217 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 MIR7844-201ENST00000616161 122 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 AC006504.8-201ENST00000621046 635 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 AP003072.5-201ENST00000623872 773 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 AL590396.2-201ENST00000636511 1041 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 MIR1246-201ENST00000636535 73 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 AC017104.5-201ENST00000637647 639 ntBASIC-0.51□□□□□ -2.49
SPG11Q96JI7 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 RAP1BP3-201ENST00000407180 549 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AL356583.2-201ENST00000426536 280 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 FO393419.3-201ENST00000428741 282 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AL050341.1-201ENST00000447743 313 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 NFU1P2-201ENST00000448700 469 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 MED28P2-201ENST00000475771 317 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 RNU2-53P-201ENST00000516257 147 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 SNORA18.7-201ENST00000516910 131 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 MRPS36P5-201ENST00000551909 298 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 SNORA75.1-201ENST00000391130 148 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 ELOCP21-201ENST00000412558 336 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 MTCO2P1-201ENST00000424648 477 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AC010154.1-201ENST00000425857 269 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 LARP7P2-201ENST00000575306 125 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 MIR4263-201ENST00000584745 83 ntBASIC-0.52□□□□□ -2.49
SPG11Q96JI7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.52□□□□□ -2.49
SPG11Q96JI7 RNU6-655P-201ENST00000362858 107 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 SNORA72.1-201ENST00000363485 129 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNU6-878P-201ENST00000384578 110 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 MIR454-201ENST00000390180 115 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNU6-994P-201ENST00000410507 111 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 DPRXP1-201ENST00000426312 460 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AL512326.2-201ENST00000426359 151 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms