Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC97Q96F63 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CCDC97Q96F63 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4□□□□□ -1.77
CCDC97Q96F63 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4□□□□□ -1.77
CCDC97Q96F63 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC97Q96F63 5S_rRNA.1-201ENST00000364415 116 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 RNA5SP125-201ENST00000364843 120 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 RNU6-418P-201ENST00000384035 107 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 RNU6-1235P-201ENST00000384559 107 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 MIR561-201ENST00000385216 97 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 RN7SKP220-201ENST00000410611 288 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 RNU6-498P-201ENST00000459468 107 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4□□□□□ -1.77
CCDC97Q96F63 RN7SKP40-201ENST00000517211 242 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 AC090616.3-201ENST00000582184 217 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4□□□□□ -1.77
CCDC97Q96F63 AL008718.3-201ENST00000610217 321 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 AC013412.1-201ENST00000610687 192 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 AC084757.4-201ENST00000616350 526 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4□□□□□ -1.77
CCDC97Q96F63 AL773545.4-201ENST00000637262 310 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 AL513478.4-201ENST00000641636 310 ntBASIC4□□□□□ -1.77
CCDC97Q96F63 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC97Q96F63 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4□□□□□ -1.77
CCDC97Q96F63 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC97Q96F63 RNA5SP399-201ENST00000364003 117 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 RNU6-283P-201ENST00000364788 107 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 MIR627-201ENST00000384979 97 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 U3.39-201ENST00000408569 239 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 RNU6-855P-201ENST00000410395 104 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 AL135790.2-201ENST00000437701 267 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 AL137159.1-201ENST00000452808 512 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 IGKV2-38-201ENST00000517443 247 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 AP005660.1-201ENST00000522972 293 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 AC025627.2-201ENST00000576220 160 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 FTX_2.1-201ENST00000618816 94 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CCDC97Q96F63 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC97Q96F63 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC97Q96F63 AC009487.4-201ENST00000624969 3585 ntBASIC3.99□□□□□ -1.77
CCDC97Q96F63 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
CCDC97Q96F63 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC97Q96F63 Z83843.1-201ENST00000604070 3685 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC97Q96F63 SNORA63.1-201ENST00000362493 131 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 SNORA71.3-201ENST00000362582 128 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 AP002088.1-201ENST00000382740 395 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC97Q96F63 AL445687.1-201ENST00000439946 251 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 PRSS3P4-201ENST00000453323 162 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 RPL29P14-201ENST00000495837 428 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 RPL31P61-201ENST00000496160 376 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 RNU6-991P-201ENST00000516168 107 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 RNU2-34P-201ENST00000516534 121 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 AC136628.3-201ENST00000521868 290 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 AP002392.1-201ENST00000537692 208 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC97Q96F63 AC039056.2-201ENST00000622261 511 ntBASIC3.98□□□□□ -1.77
CCDC97Q96F63 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC97Q96F63 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC97Q96F63 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC97Q96F63 MIR208A-201ENST00000362287 71 ntBASIC3.97□□□□□ -1.77
CCDC97Q96F63 RNU6-1020P-201ENST00000363684 107 ntBASIC3.97□□□□□ -1.77
CCDC97Q96F63 SNORA20B-201ENST00000384220 132 ntBASIC3.97□□□□□ -1.77
CCDC97Q96F63 Y_RNA.555-201ENST00000384673 110 ntBASIC3.97□□□□□ -1.77
CCDC97Q96F63 RNU6-763P-201ENST00000390865 106 ntBASIC3.97□□□□□ -1.77
CCDC97Q96F63 MIR873-201ENST00000401120 77 ntBASIC3.97□□□□□ -1.77
CCDC97Q96F63 AL355796.1-201ENST00000406706 323 ntBASIC3.97□□□□□ -1.77
CCDC97Q96F63 RNU2-48P-201ENST00000410694 191 ntBASIC3.97□□□□□ -1.77
CCDC97Q96F63 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC97Q96F63 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC97Q96F63 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC97Q96F63 MIR6500-201ENST00000622700 86 ntBASIC3.97□□□□□ -1.77
CCDC97Q96F63 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC97Q96F63 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC97Q96F63 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC97Q96F63 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC97Q96F63 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CCDC97Q96F63 SNORD114-7-201ENST00000362520 77 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 RNU6-801P-201ENST00000364087 105 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 Y_RNA.262-201ENST00000364641 102 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 Y_RNA.270-201ENST00000364693 104 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 Y_RNA.304-201ENST00000365011 112 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 Y_RNA.368-201ENST00000365547 113 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC97Q96F63 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC97Q96F63 SNORA57.3-201ENST00000411095 141 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC97Q96F63 Y_RNA.637-201ENST00000459424 114 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 AC010531.2-201ENST00000465012 153 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 AC093259.1-201ENST00000509755 300 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 AC104619.4-201ENST00000510773 249 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 AC025754.2-201ENST00000606491 432 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 AC090115.4-201ENST00000609970 188 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 AC096577.2-201ENST00000611455 153 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 AC019176.2-201ENST00000611579 315 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 AL078604.3-201ENST00000615580 211 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 AL591424.2-201ENST00000617023 128 ntBASIC3.96□□□□□ -1.78
CCDC97Q96F63 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC97Q96F63 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms