Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.99□□□□□ -2.25
APH1AQ96BI3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.99□□□□□ -2.25
APH1AQ96BI3 AL391840.1-201ENST00000571144 367 ntBASIC0.99□□□□□ -2.25
APH1AQ96BI3 MIR3664-201ENST00000579074 99 ntBASIC0.99□□□□□ -2.25
APH1AQ96BI3 AC040904.1-201ENST00000590850 223 ntBASIC0.99□□□□□ -2.25
APH1AQ96BI3 TCL6_2.1-201ENST00000615162 119 ntBASIC0.99□□□□□ -2.25
APH1AQ96BI3 AC099654.5-201ENST00000636479 350 ntBASIC0.99□□□□□ -2.25
APH1AQ96BI3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
APH1AQ96BI3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
APH1AQ96BI3 RNU6-227P-201ENST00000362865 103 ntBASIC0.98□□□□□ -2.25
APH1AQ96BI3 RNU1-22P-201ENST00000363334 158 ntBASIC0.98□□□□□ -2.25
APH1AQ96BI3 Y_RNA.159-201ENST00000363674 87 ntBASIC0.98□□□□□ -2.25
APH1AQ96BI3 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
APH1AQ96BI3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.98□□□□□ -2.25
APH1AQ96BI3 SNRPEP10-201ENST00000420249 274 ntBASIC0.98□□□□□ -2.25
APH1AQ96BI3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.98□□□□□ -2.25
APH1AQ96BI3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.98□□□□□ -2.25
APH1AQ96BI3 AC114982.1-201ENST00000469402 321 ntBASIC0.98□□□□□ -2.25
APH1AQ96BI3 RNU6-430P-201ENST00000517078 107 ntBASIC0.98□□□□□ -2.25
APH1AQ96BI3 MTND4P7-201ENST00000523876 130 ntBASIC0.98□□□□□ -2.25
APH1AQ96BI3 MIR4781-201ENST00000585250 76 ntBASIC0.98□□□□□ -2.25
APH1AQ96BI3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.98□□□□□ -2.25
APH1AQ96BI3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.98□□□□□ -2.25
APH1AQ96BI3 RNU5B-2P-201ENST00000363036 113 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 SNORA33-201ENST00000363664 130 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 RNU6-996P-201ENST00000365438 107 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 SNORA29-201ENST00000384183 140 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.97□□□□□ -2.25
APH1AQ96BI3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.97□□□□□ -2.25
APH1AQ96BI3 AC004386.2-201ENST00000441858 148 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 PGBD4P5-201ENST00000445958 426 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.97□□□□□ -2.25
APH1AQ96BI3 RNU7-63P-201ENST00000459054 62 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 HMGN1P7-201ENST00000491722 313 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 RNU6-1146P-201ENST00000516282 102 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 RNU7-40P-201ENST00000516397 64 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 RN7SKP88-201ENST00000516847 250 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 MTCO2P4-201ENST00000517968 247 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 AC024995.1-201ENST00000523014 93 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 CENPUP1-201ENST00000526649 1202 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.97□□□□□ -2.25
APH1AQ96BI3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.97□□□□□ -2.25
APH1AQ96BI3 MTATP6P24-201ENST00000576835 677 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 AC016727.2-201ENST00000603988 621 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 AC109347.2-201ENST00000610220 349 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 7SK.8-201ENST00000612110 250 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 HULC.1-201ENST00000612720 240 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.97□□□□□ -2.25
APH1AQ96BI3 7SK.11-201ENST00000615477 250 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 uc_338.34-201ENST00000617467 174 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 7SK.13-201ENST00000622040 250 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 AC027335.2-201ENST00000624030 375 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 AC005609.4-201ENST00000625071 447 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
APH1AQ96BI3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
APH1AQ96BI3 Y_RNA.4-201ENST00000362333 112 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 RNA5SP219-201ENST00000390940 113 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 CDK8P2-201ENST00000415020 547 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.96□□□□□ -2.26
APH1AQ96BI3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.96□□□□□ -2.26
APH1AQ96BI3 AC009237.7-201ENST00000447357 229 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 NFU1P2-201ENST00000448700 469 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 AC016717.1-201ENST00000448918 286 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 AC073415.1-201ENST00000449240 153 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.96□□□□□ -2.26
APH1AQ96BI3 COX6CP14-201ENST00000469580 174 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 MTND3P7-201ENST00000474435 343 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 HMGN1P12-201ENST00000499125 195 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 CCDC34P1-201ENST00000507441 517 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 AC025465.4-201ENST00000513422 638 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 SNORA14.1-201ENST00000516113 141 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.96□□□□□ -2.26
APH1AQ96BI3 MIR5006-201ENST00000583027 110 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 AC104458.1-201ENST00000608243 463 ntBASIC0.96□□□□□ -2.26
APH1AQ96BI3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.26
APH1AQ96BI3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
APH1AQ96BI3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
APH1AQ96BI3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
APH1AQ96BI3 Y_RNA.169-201ENST00000363745 96 ntBASIC0.95□□□□□ -2.26
APH1AQ96BI3 RNU6-968P-201ENST00000384076 107 ntBASIC0.95□□□□□ -2.26
APH1AQ96BI3 SNORA25-201ENST00000384384 134 ntBASIC0.95□□□□□ -2.26
APH1AQ96BI3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
APH1AQ96BI3 RNU7-34P-201ENST00000459394 64 ntBASIC0.95□□□□□ -2.26
APH1AQ96BI3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.95□□□□□ -2.26
APH1AQ96BI3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.95□□□□□ -2.26
APH1AQ96BI3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.95□□□□□ -2.26
APH1AQ96BI3 AC080078.3-201ENST00000605407 463 ntBASIC0.95□□□□□ -2.26
APH1AQ96BI3 AL354950.2-201ENST00000617939 290 ntBASIC0.95□□□□□ -2.26
APH1AQ96BI3 Y_RNA.164-201ENST00000363709 102 ntBASIC0.94□□□□□ -2.26
APH1AQ96BI3 RNA5SP259-201ENST00000365541 109 ntBASIC0.94□□□□□ -2.26
APH1AQ96BI3 RNU6-1286P-201ENST00000383871 107 ntBASIC0.94□□□□□ -2.26
APH1AQ96BI3 SNORA22-201ENST00000383907 134 ntBASIC0.94□□□□□ -2.26
APH1AQ96BI3 SNORA22C-201ENST00000384614 134 ntBASIC0.94□□□□□ -2.26
APH1AQ96BI3 RNU6-950P-201ENST00000384651 107 ntBASIC0.94□□□□□ -2.26
APH1AQ96BI3 MIR586-201ENST00000385035 97 ntBASIC0.94□□□□□ -2.26
APH1AQ96BI3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
APH1AQ96BI3 AL606923.1-201ENST00000406616 190 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms