Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.17□□□□□ -2.06
SKA1Q96BD8 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.17□□□□□ -2.06
SKA1Q96BD8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SKA1Q96BD8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SKA1Q96BD8 SNORD115-32-201ENST00000364079 82 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 RNU6-831P-201ENST00000384548 107 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 SNORA64-201ENST00000384674 134 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 AC019129.1-201ENST00000403786 261 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 FCF1P9-201ENST00000412546 282 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 AL139396.1-201ENST00000421137 167 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 EIF1P1-201ENST00000421436 341 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 MTCO3P46-201ENST00000425787 232 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.16□□□□□ -2.06
SKA1Q96BD8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.16□□□□□ -2.06
SKA1Q96BD8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.16□□□□□ -2.06
SKA1Q96BD8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.16□□□□□ -2.06
SKA1Q96BD8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.16□□□□□ -2.06
SKA1Q96BD8 RNU6-948P-201ENST00000516374 107 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 RNU6-548P-201ENST00000517083 115 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 RNU1-54P-201ENST00000517181 120 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.16□□□□□ -2.06
SKA1Q96BD8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
SKA1Q96BD8 MIR5094-201ENST00000578766 85 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 AC010900.2-201ENST00000604508 210 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 uc_338.20-201ENST00000621563 178 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 ZNF204P-201ENST00000416749 2397 ntBASIC2.16□□□□□ -2.06
SKA1Q96BD8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SKA1Q96BD8 RNU6-418P-201ENST00000384035 107 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 MIR32-201ENST00000384965 70 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 MIR153-2-201ENST00000385225 87 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.15□□□□□ -2.07
SKA1Q96BD8 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 AC011352.1-201ENST00000512300 793 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 RNU6-856P-201ENST00000516959 98 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 SNORA44.1-201ENST00000517031 108 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 RNA5SP454-201ENST00000517231 127 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.15□□□□□ -2.07
SKA1Q96BD8 SUB1P4-201ENST00000566062 339 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 MIR4273-201ENST00000582824 84 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.15□□□□□ -2.07
SKA1Q96BD8 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 AC002553.4-201ENST00000616896 331 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 AC022513.1-201ENST00000624512 117 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 AC027514.1-201ENST00000588561 1603 ntBASIC2.15□□□□□ -2.07
SKA1Q96BD8 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
SKA1Q96BD8 RNU6-245P-201ENST00000384020 107 ntBASIC2.14□□□□□ -2.07
SKA1Q96BD8 U8.10-201ENST00000384260 133 ntBASIC2.14□□□□□ -2.07
SKA1Q96BD8 AL079342.1-201ENST00000401460 267 ntBASIC2.14□□□□□ -2.07
SKA1Q96BD8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.14□□□□□ -2.07
SKA1Q96BD8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.14□□□□□ -2.07
SKA1Q96BD8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.14□□□□□ -2.07
SKA1Q96BD8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.14□□□□□ -2.07
SKA1Q96BD8 snoU13.30-201ENST00000458951 104 ntBASIC2.14□□□□□ -2.07
SKA1Q96BD8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.14□□□□□ -2.07
SKA1Q96BD8 RNU6-566P-201ENST00000516790 107 ntBASIC2.14□□□□□ -2.07
SKA1Q96BD8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.14□□□□□ -2.07
SKA1Q96BD8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SKA1Q96BD8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
SKA1Q96BD8 SNORD115-8-201ENST00000363856 82 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 SNORD115-38-201ENST00000365037 82 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 RNU6-306P-201ENST00000384617 107 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 MIR586-201ENST00000385035 97 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 MIR549A-201ENST00000385268 96 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 RNU6-510P-201ENST00000391239 108 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.13□□□□□ -2.07
SKA1Q96BD8 MTATP6P13-201ENST00000438531 667 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 Y_RNA.638-201ENST00000459374 113 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 RNA5SP364-201ENST00000516938 78 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.13□□□□□ -2.07
SKA1Q96BD8 AC018638.8-201ENST00000588755 281 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 AC069114.2-201ENST00000604699 304 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 AC103810.8-201ENST00000607347 118 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 AL353997.5-201ENST00000618886 171 ntBASIC2.13□□□□□ -2.07
SKA1Q96BD8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SKA1Q96BD8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 RNU6-1305P-201ENST00000364353 104 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 RNU6-596P-201ENST00000365395 98 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 RNU6-975P-201ENST00000384296 105 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 RPL21P111-201ENST00000418453 477 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 HMGB1P18-201ENST00000438801 619 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 RNU6-498P-201ENST00000459468 107 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 AC116337.1-201ENST00000509680 687 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 RNU6-344P-201ENST00000516635 111 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 RNU6-1088P-201ENST00000516850 104 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.12□□□□□ -2.07
SKA1Q96BD8 AC010928.2-201ENST00000588017 287 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 AC007014.2-201ENST00000615581 479 ntBASIC2.12□□□□□ -2.07
SKA1Q96BD8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SKA1Q96BD8 RNU6-137P-201ENST00000363680 108 ntBASIC2.11□□□□□ -2.07
SKA1Q96BD8 RNU5F-3P-201ENST00000363767 117 ntBASIC2.11□□□□□ -2.07
SKA1Q96BD8 Y_RNA.319-201ENST00000365138 92 ntBASIC2.11□□□□□ -2.07
SKA1Q96BD8 RNU6-541P-201ENST00000384709 110 ntBASIC2.11□□□□□ -2.07
SKA1Q96BD8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SKA1Q96BD8 RNU6-192P-201ENST00000391253 100 ntBASIC2.11□□□□□ -2.07
SKA1Q96BD8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.11□□□□□ -2.07
SKA1Q96BD8 RNU6-1148P-201ENST00000410992 104 ntBASIC2.11□□□□□ -2.07
SKA1Q96BD8 EBAG9P1-201ENST00000418955 543 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms