Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC136628.3-201ENST00000521868 290 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 AL078604.3-201ENST00000615580 211 ntBASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.13□□□□□ -1.75
VTI1AQ96AJ9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 snoU2_19.1-201ENST00000362361 80 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 SNORD9-201ENST00000362566 104 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 RNU4-84P-201ENST00000364200 139 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 RNU6-818P-201ENST00000364837 108 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 RNU6-449P-201ENST00000383914 107 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 SNORA48.2-201ENST00000390926 124 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 RNU6-131P-201ENST00000391144 107 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 RNU6-381P-201ENST00000391259 108 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 AL365496.1-201ENST00000426885 215 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 AL031183.1-201ENST00000457667 207 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 SNORA59A-201ENST00000459326 152 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 RPS29P2-201ENST00000479278 136 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 TRBV12-2-201ENST00000489763 344 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 AC092435.3-201ENST00000565538 3654 ntBASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.12□□□□□ -1.75
VTI1AQ96AJ9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 FAM35DP-201ENST00000323387 2712 ntBASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 RNU6-1048P-201ENST00000364054 107 ntBASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 Y_RNA.243-201ENST00000364481 109 ntBASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 RNU6-1027P-201ENST00000383998 107 ntBASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 RNU1-57P-201ENST00000384491 166 ntBASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 SNORA12-201ENST00000391162 147 ntBASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 RAC1P2-201ENST00000511164 579 ntBASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 AC134026.1-201ENST00000623249 2239 ntBASIC4.11□□□□□ -1.75
VTI1AQ96AJ9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 SNORA38.1-201ENST00000364172 131 ntBASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 RNU4-10P-201ENST00000364383 140 ntBASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 Y_RNA.400-201ENST00000383963 111 ntBASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 RNA5SP424-201ENST00000390988 115 ntBASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 AC025281.1-201ENST00000567026 265 ntBASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 MIR7851-201ENST00000610611 160 ntBASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 AC069528.2-201ENST00000624849 1991 ntBASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 AC010329.5-201ENST00000623497 2174 ntBASIC4.1□□□□□ -1.75
VTI1AQ96AJ9 RNU6-1081P-201ENST00000384537 107 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 RNA5SP120-201ENST00000410900 112 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 TOMM22P2-201ENST00000430735 237 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 RN7SL807P-201ENST00000470923 297 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 RN7SKP83-201ENST00000516512 178 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 SNORD116-25-201ENST00000516517 92 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 HSPE1P18-201ENST00000517602 280 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 AC079598.5-201ENST00000547460 117 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 AC013791.1-201ENST00000616619 62 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 SCARNA15.3-201ENST00000626315 122 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 SCARNA4.1-201ENST00000628597 123 ntBASIC4.09□□□□□ -1.75
VTI1AQ96AJ9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VTI1AQ96AJ9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
VTI1AQ96AJ9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 snoU2_19.4-201ENST00000364329 80 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 RNU6-275P-201ENST00000364910 107 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.497-201ENST00000384447 98 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.568-201ENST00000384742 113 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 AL162725.1-201ENST00000435405 301 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 AC025518.1-201ENST00000479856 347 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 RNA5SP208-201ENST00000516156 78 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 AC021269.2-201ENST00000532318 330 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 AC008011.1-201ENST00000545989 227 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 MIR5047-201ENST00000579212 100 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 U6.115-201ENST00000636045 103 ntBASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.08□□□□□ -1.76
VTI1AQ96AJ9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.357-201ENST00000365487 109 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 SNORA72.4-201ENST00000384174 132 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.488-201ENST00000384403 102 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 Y_RNA.572-201ENST00000384757 98 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 MIR128-1-201ENST00000384921 82 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 MIR548B-201ENST00000385247 97 ntBASIC4.07□□□□□ -1.76
VTI1AQ96AJ9 CYCSP4-201ENST00000429682 331 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms