Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ATP2A3Q93084 DYNLT3P2-201ENST00000442517 295 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 AC016700.2-201ENST00000446011 156 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.72□□□□□ -1.97
ATP2A3Q93084 AC073901.1-201ENST00000462471 408 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.72□□□□□ -1.97
ATP2A3Q93084 CKS1BP2-201ENST00000497342 240 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 Y_RNA.680-201ENST00000516441 93 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 AC022616.4-201ENST00000522985 181 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 AC090517.1-201ENST00000569307 266 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 AL355297.3-201ENST00000604082 446 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 AL159153.1-201ENST00000619688 317 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 SNORA43.4-201ENST00000629559 138 ntBASIC2.72□□□□□ -1.97
ATP2A3Q93084 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
ATP2A3Q93084 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATP2A3Q93084 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATP2A3Q93084 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
ATP2A3Q93084 OR56A5-201ENST00000340110 738 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 RNU6-529P-201ENST00000363383 104 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 SNORD14.1-201ENST00000365609 90 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 SNORA29-201ENST00000384183 140 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 RNU1-57P-201ENST00000384491 166 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 MIR186-201ENST00000384988 86 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 MIR625-201ENST00000385047 85 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 MT-TW-201ENST00000387382 68 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
ATP2A3Q93084 AL139095.1-201ENST00000404326 391 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 MIR1302-3-201ENST00000408128 138 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 MIR1252-201ENST00000408861 65 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 ELOCP20-201ENST00000422460 345 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 AL358453.1-201ENST00000422522 250 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 AC092423.1-201ENST00000430165 186 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.71□□□□□ -1.98
ATP2A3Q93084 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.71□□□□□ -1.98
ATP2A3Q93084 snoU13.14-201ENST00000459372 104 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 RPL30P1-201ENST00000488676 339 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 SRIP1-201ENST00000489235 288 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 RPL23AP75-201ENST00000491601 451 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.71□□□□□ -1.98
ATP2A3Q93084 RNU6-397P-201ENST00000516226 104 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 RNU7-4P-201ENST00000516961 62 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 AC091544.4-201ENST00000555268 342 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.71□□□□□ -1.98
ATP2A3Q93084 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.71□□□□□ -1.98
ATP2A3Q93084 MIR3136-201ENST00000583498 78 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 Z98751.3-201ENST00000604447 521 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.71□□□□□ -1.98
ATP2A3Q93084 SCARNA4-201ENST00000629045 128 ntBASIC2.71□□□□□ -1.98
ATP2A3Q93084 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
ATP2A3Q93084 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATP2A3Q93084 RNU6-655P-201ENST00000362858 107 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 Y_RNA.214-201ENST00000364201 112 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 Y_RNA.424-201ENST00000384063 103 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 SNORA26.3-201ENST00000391119 136 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 RNU6-130P-201ENST00000411112 103 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 snoU13.30-201ENST00000458951 104 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 SNORA40.14-201ENST00000516543 86 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 RNU6-567P-201ENST00000516746 107 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 RNU6-1271P-201ENST00000517049 105 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 AC104581.2-201ENST00000572227 430 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 MIR4635-201ENST00000583759 79 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 AC100812.1-201ENST00000607622 580 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 AL590808.1-201ENST00000618696 141 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 U2.1-201ENST00000618978 145 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 AC137590.2-201ENST00000619709 240 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 SNORD98-201ENST00000636377 67 ntBASIC2.7□□□□□ -1.98
ATP2A3Q93084 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
ATP2A3Q93084 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
ATP2A3Q93084 RNA5SP393-201ENST00000363423 117 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 SNORA25.6-201ENST00000364121 118 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 Y_RNA.405-201ENST00000383979 100 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 Y_RNA.451-201ENST00000384200 100 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 Y_RNA.483-201ENST00000384380 101 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 RNU6-1026P-201ENST00000384465 108 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 Y_RNA.524-201ENST00000384564 100 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 Y_RNA.561-201ENST00000384694 100 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 MT-TG-201ENST00000387429 68 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 SNORA12.2-201ENST00000391040 156 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.69□□□□□ -1.98
ATP2A3Q93084 AC003685.2-201ENST00000422795 395 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.69□□□□□ -1.98
ATP2A3Q93084 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.69□□□□□ -1.98
ATP2A3Q93084 Z82188.1-201ENST00000436709 154 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.69□□□□□ -1.98
ATP2A3Q93084 U8.22-201ENST00000459141 133 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 AC087477.1-201ENST00000465747 340 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 TRBV12-1-201ENST00000479785 344 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 MTND1P19-201ENST00000511780 315 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 SNORA31.15-201ENST00000516771 132 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 Y_RNA.706-201ENST00000516933 99 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
ATP2A3Q93084 AL138963.2-201ENST00000605137 226 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 MIR8062-201ENST00000621515 85 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 CTSLP2-204ENST00000629029 392 ntBASIC2.69□□□□□ -1.98
ATP2A3Q93084 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.69□□□□□ -1.98
ATP2A3Q93084 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms