Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SNORA48.2-201ENST00000390926 124 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 SNORD115-46-201ENST00000390982 71 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 SNORA46.1-201ENST00000391069 153 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 MIR320B2-201ENST00000408479 138 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 AL139281.1-201ENST00000422120 335 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 AL135938.1-201ENST00000443141 297 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 RPS29P12-201ENST00000460178 152 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 SEM1P1-201ENST00000506694 209 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 RNU6-408P-201ENST00000515910 100 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 SNORA25.14-201ENST00000516481 132 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 AC027176.1-201ENST00000560204 514 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 SNRPGP20-201ENST00000604477 205 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 AC062037.2-201ENST00000610137 73 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 U3.9-201ENST00000363823 204 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.188-201ENST00000363952 111 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.483-201ENST00000384380 101 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 SNORA44-201ENST00000384584 132 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 MIR592-201ENST00000384959 97 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 AC104332.2-201ENST00000429959 156 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 AC010095.1-201ENST00000443543 144 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 AC007395.1-201ENST00000451333 677 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 RPL26P26-201ENST00000480251 434 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.683-201ENST00000516508 93 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 AC026470.2-201ENST00000561492 181 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 MIR4325-201ENST00000583049 90 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 RPL30P11-203ENST00000598995 310 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 AL670379.2-201ENST00000604983 252 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.75□□□□□ -1.97
ATG4AQ8WYN0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.179-201ENST00000363844 90 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 RNU6-793P-201ENST00000384233 104 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.518-201ENST00000384552 113 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 CBX3P6-201ENST00000430257 527 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 MICF-203ENST00000432679 129 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 RNU6-570P-201ENST00000517051 105 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 AC009487.2-201ENST00000420969 6821 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
ATG4AQ8WYN0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 AC010329.5-201ENST00000623497 2174 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 RNU6-937P-201ENST00000384325 106 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 RNA5SP21-201ENST00000410917 96 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 AC005002.2-201ENST00000438228 269 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 TRBVB-201ENST00000477100 408 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 AC098869.1-201ENST00000481627 292 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 SNORA40.9-201ENST00000515895 93 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 RNU6-1271P-201ENST00000517049 105 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 CYCSP23-201ENST00000519781 313 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 AC023157.2-201ENST00000540596 141 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 AL357075.2-201ENST00000614906 189 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 AC005562.2-201ENST00000618264 111 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 MIR7515-201ENST00000637837 67 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 MTND5P35-201ENST00000557537 1720 ntBASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
ATG4AQ8WYN0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 RNU1-62P-201ENST00000362599 164 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.84-201ENST00000363011 104 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 SNORA68.1-201ENST00000364537 132 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.307-201ENST00000365022 117 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 SNORD63-201ENST00000384262 68 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 MIR29B2-201ENST00000385055 81 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 MIR634-201ENST00000385208 97 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 RNU2-25P-201ENST00000411041 191 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 AC096920.1-201ENST00000423991 241 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 AC087499.2-201ENST00000432861 149 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 SNORD127-201ENST00000458892 86 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 AC073901.1-201ENST00000462471 408 ntBASIC2.72□□□□□ -1.97
ATG4AQ8WYN0 AC091179.3-201ENST00000474761 144 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms