Protein–RNA interactions for Protein: Q8TEQ0

SNX29, Sorting nexin-29, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29Q8TEQ0 PWAR6-201ENST00000552334 4618 ntBASIC3.83□□□□□ -1.8
SNX29Q8TEQ0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 AL021368.2-201ENST00000606125 5352 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 RNU6-1305P-201ENST00000364353 104 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 RNU4-10P-201ENST00000364383 140 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 Y_RNA.400-201ENST00000383963 111 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 Y_RNA.488-201ENST00000384403 102 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 RN7SKP111-201ENST00000410349 271 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 AL139281.1-201ENST00000422120 335 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 RPL23AP67-201ENST00000465341 474 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 FCF1P8-201ENST00000510322 597 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 AC069294.1-201ENST00000608397 350 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 U6.115-201ENST00000636045 103 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 AL136164.4-201ENST00000625013 2135 ntBASIC3.82□□□□□ -1.8
SNX29Q8TEQ0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 RNA5SP295-201ENST00000362655 121 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 Y_RNA.341-201ENST00000365341 102 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 MIR490-201ENST00000384865 128 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 MIR449B-201ENST00000384995 97 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 MIR548B-201ENST00000385247 97 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC126124.2-201ENST00000413542 321 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC097463.2-201ENST00000421074 142 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC017083.1-201ENST00000428093 483 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 RPS29P2-201ENST00000479278 136 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC021269.2-201ENST00000532318 330 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC091895.1-201ENST00000624494 256 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AC090517.3-201ENST00000625170 141 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
SNX29Q8TEQ0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 AC000403.1-201ENST00000613696 3585 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 MIR30E-201ENST00000362104 92 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 RNA5SP50-201ENST00000363731 107 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 Y_RNA.368-201ENST00000365547 113 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 Y_RNA.497-201ENST00000384447 98 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 SNORA8.3-201ENST00000384679 139 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 EIF4EP4-201ENST00000424916 578 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 YME1L1P1-201ENST00000429435 297 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 RN7SL293P-201ENST00000481765 281 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 SNORD116-25-201ENST00000516517 92 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 MIR2276-201ENST00000516886 89 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 MIR4429-201ENST00000580105 73 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 MIR4425-201ENST00000580572 84 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 AC008739.2-201ENST00000597006 317 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 RPL30P11-203ENST00000598995 310 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 RPL17P51-201ENST00000605218 238 ntBASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX29Q8TEQ0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 AL356274.2-201ENST00000624379 3752 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 RNU6-103P-201ENST00000363686 107 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 RNU6-899P-201ENST00000363947 107 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 RNU6-1117P-201ENST00000384525 104 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 RNU6-131P-201ENST00000391144 107 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 RN7SKP27-201ENST00000410684 333 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 AL162725.1-201ENST00000435405 301 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 CR769767.1-201ENST00000436337 346 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 AC006445.1-201ENST00000491925 405 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 SNORA70.12-201ENST00000516084 153 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 MIR4765-201ENST00000585007 77 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 Y_RNA.802-201ENST00000614892 130 ntBASIC3.79□□□□□ -1.8
SNX29Q8TEQ0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms