Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF702P-202ENST00000434269 1966 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 RNA5SP276-201ENST00000362580 94 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 RNU1-76P-201ENST00000362903 159 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 RNU6-160P-201ENST00000384591 107 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 RNA5SP465-201ENST00000391195 109 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 AL358453.1-201ENST00000422522 250 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 EIF4EP2-201ENST00000422816 654 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 AC096920.1-201ENST00000423991 241 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 SNRPEP8-201ENST00000442866 260 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 HMGN2P23-201ENST00000456759 269 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 Y_RNA.682-201ENST00000516457 100 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 RNU1-54P-201ENST00000517181 120 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 DEFB131C-201ENST00000528817 165 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 AL022345.1-201ENST00000607292 135 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 MIR6128-201ENST00000615528 109 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 AC130454.1-201ENST00000622948 401 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 SCARNA4-201ENST00000629045 128 ntBASIC1.6□□□□□ -2.15
C9orf40Q8IXQ3 MTND5P9-201ENST00000503854 1755 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 Y_RNA.72-201ENST00000362894 103 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 RNU6-23P-201ENST00000363283 107 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 SNORD31B-201ENST00000364977 69 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 MIR597-201ENST00000384968 97 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 MTND3P8-201ENST00000412909 339 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 AC123900.1-201ENST00000420390 96 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 MTCO3P46-201ENST00000425787 232 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 AL035666.1-201ENST00000446195 348 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 FO393415.2-201ENST00000480085 343 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 RNU6-548P-201ENST00000517083 115 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 AC026470.2-201ENST00000561492 181 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 DEFB122-202ENST00000569013 197 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 MIR4287-201ENST00000579398 78 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 AC005562.2-201ENST00000618264 111 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 AL133216.2-202ENST00000634512 349 ntBASIC1.59□□□□□ -2.15
C9orf40Q8IXQ3 LINC02555-201ENST00000563933 1951 ntBASIC1.59□□□□□ -2.16
C9orf40Q8IXQ3 MTND4P5-201ENST00000435821 1374 ntBASIC1.59□□□□□ -2.16
C9orf40Q8IXQ3 CASC19-280ENST00000642102 1351 ntBASIC1.59□□□□□ -2.16
C9orf40Q8IXQ3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 RNA5SP493-201ENST00000364115 91 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 SNORD114-6-201ENST00000364393 72 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 RNU4-9P-201ENST00000364951 139 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 MIR549A-201ENST00000385268 96 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 SNORA12.2-201ENST00000391040 156 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AL512604.1-201ENST00000404812 257 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 MTND1P2-201ENST00000430604 821 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AC007215.1-201ENST00000464893 276 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 MTND5P5-201ENST00000503764 376 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AC087441.2-201ENST00000529141 262 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AC104581.2-201ENST00000572227 430 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 MIR4273-201ENST00000582824 84 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 CYP2C61P-201ENST00000604072 290 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AL590240.4-201ENST00000616908 390 ntBASIC1.58□□□□□ -2.16
C9orf40Q8IXQ3 AC008555.8-201ENST00000623602 2168 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 CBX3P1-201ENST00000325243 554 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 MIR32-201ENST00000384965 70 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 AC139712.2-201ENST00000424302 339 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 USP9YP30-201ENST00000430729 455 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 Z82188.1-201ENST00000436709 154 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 MTND2P29-201ENST00000438595 412 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 AC004386.2-201ENST00000441858 148 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 AC016925.1-201ENST00000458303 298 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 AC108210.2-201ENST00000503681 201 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 MIR5696-201ENST00000578474 85 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 MIR5006-201ENST00000583027 110 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 AC010928.2-201ENST00000588017 287 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.57□□□□□ -2.16
C9orf40Q8IXQ3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms