Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 MIR23A-201ENST00000385245 73 ntBASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 RNA5SP504-201ENST00000410676 117 ntBASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 COX6CP14-201ENST00000469580 174 ntBASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-255P-201ENST00000516957 105 ntBASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-711P-201ENST00000517255 106 ntBASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 AC012531.5-201ENST00000611375 151 ntBASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-324P-201ENST00000363957 106 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 Y_RNA.217-201ENST00000364214 105 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 RNA5SP354-201ENST00000391247 136 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 AL357075.1-201ENST00000404107 726 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 AC097463.2-201ENST00000421074 142 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 SNORD2.1-201ENST00000458762 69 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 Y_RNA.641-201ENST00000459414 105 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 AC109925.1-201ENST00000478069 331 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 SNORA74D-201ENST00000516404 141 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 RN7SKP57-201ENST00000517248 293 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 AC027176.1-201ENST00000560204 514 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 uc_338.14-201ENST00000613162 166 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 AC091953.5-201ENST00000622919 233 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM48Q8IWZ4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 RNU1-105P-201ENST00000363470 161 ntBASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 SNORA14A-201ENST00000364773 135 ntBASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 SNORA9-201ENST00000384215 133 ntBASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 RPL23AP62-201ENST00000463396 453 ntBASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 AC006445.1-201ENST00000491925 405 ntBASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 AC006380.1-201ENST00000603598 186 ntBASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 SNORD11B-201ENST00000607707 90 ntBASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 AC073349.3-201ENST00000617616 186 ntBASIC3.18□□□□□ -1.9
TRIM48Q8IWZ4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-1264P-201ENST00000383891 107 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-211P-201ENST00000384047 107 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-918P-201ENST00000391219 106 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 U3.40-201ENST00000408706 208 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 RN7SL504P-201ENST00000494496 287 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-436P-201ENST00000516171 114 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-344P-201ENST00000516635 111 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 MIR4474-201ENST00000579189 78 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 AC068205.3-201ENST00000636385 468 ntBASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TRIM48Q8IWZ4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-525P-201ENST00000363685 104 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 Z75741.1-201ENST00000446793 314 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 RN7SL863P-201ENST00000462370 296 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 MRPS36P2-201ENST00000512569 299 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 RNU2-12P-201ENST00000517216 168 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AC068657.1-201ENST00000520807 306 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 MIR3133-201ENST00000583157 78 ntBASIC3.16□□□□□ -1.9
TRIM48Q8IWZ4 MIR4765-201ENST00000585007 77 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms