Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RNU6-112P-201ENST00000363599 104 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 RNU6-1329P-201ENST00000365664 107 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 RNU6-259P-201ENST00000383999 107 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 MIR1267-201ENST00000408723 78 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 TIMM9P3-201ENST00000428659 274 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 SRRM1P2-201ENST00000464531 1192 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 RPL9P9-202ENST00000466501 579 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 Y_RNA.654-201ENST00000497848 106 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 SNORA19.2-201ENST00000516013 114 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 MTND2P38-201ENST00000522536 667 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 SNORA59B-202ENST00000578183 701 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 MIR5094-201ENST00000578766 85 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 RPL17P51-201ENST00000605218 238 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 AC092807.2-201ENST00000609367 243 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 AC068205.3-201ENST00000636385 468 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 Y_RNA.51-201ENST00000362725 102 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 RNU6-1085P-201ENST00000363576 107 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 RNU6-1317P-201ENST00000364582 104 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 SNORA25.9-201ENST00000365087 128 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 SNORA18.2-201ENST00000383865 132 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 Y_RNA.481-201ENST00000384373 102 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 RNU2-66P-201ENST00000410650 161 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 AC099677.2-201ENST00000436385 175 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 UBE2V1P8-201ENST00000437166 265 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 MTND3P16-201ENST00000452205 344 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 AC016925.1-201ENST00000458303 298 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 RPS23P5-201ENST00000495419 428 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 SNORD60.2-201ENST00000516883 86 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 RNU6-835P-201ENST00000516974 104 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 SUMO2P18-201ENST00000518873 252 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 AC084364.2-201ENST00000546924 395 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 AC005668.1-201ENST00000571142 476 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 AC245008.1-201ENST00000608123 476 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 Z99129.1-201ENST00000612510 255 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 AL121890.5-201ENST00000620848 304 ntBASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
CDKL3Q8IVW4 Y_RNA.167-201ENST00000363735 109 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 RNU6-271P-201ENST00000363858 105 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 SNORA29-201ENST00000384183 140 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 MTCO3P40-201ENST00000392516 676 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 RNU6-648P-201ENST00000410190 107 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 USP9YP14-201ENST00000430663 563 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 MRPS10P2-201ENST00000431226 381 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 USP9YP28-201ENST00000435142 589 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AL359672.1-201ENST00000442302 409 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 U8.21-201ENST00000459536 136 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 RNU6-1208P-201ENST00000459588 107 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AC010531.2-201ENST00000465012 153 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 HMGN1P13-201ENST00000505795 138 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AC091885.1-201ENST00000506658 268 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AC016256.1-201ENST00000547971 354 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 SCOCP1-201ENST00000554676 349 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AL157687.1-201ENST00000554853 619 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 FER-210ENST00000628534 558 ntTSL 5 BASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 OR5AK4P-201ENST00000635912 903 ntBASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDKL3Q8IVW4 AL159152.1-201ENST00000635019 2587 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 RNU6-296P-201ENST00000384608 107 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 CALM2P3-201ENST00000400429 449 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 RPL21P111-201ENST00000418453 477 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 ARL5AP1-201ENST00000418991 388 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 TOMM22P2-201ENST00000430735 237 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 AC007395.1-201ENST00000451333 677 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 AC092436.3-201ENST00000511788 257 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 CTHRC1P1-201ENST00000605383 469 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 AC083806.3-201ENST00000614016 455 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 AC073534.2-201ENST00000620377 381 ntBASIC1.19□□□□□ -2.22
CDKL3Q8IVW4 AC124864.2-201ENST00000624736 186 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms