Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
PRPF39Q86UA1 SCARNA4-201ENST00000629045 128 ntBASIC2.02□□□□□ -2.09
PRPF39Q86UA1 MTND4P5-201ENST00000435821 1374 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRPF39Q86UA1 MTND5P9-201ENST00000503854 1755 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 RNU6-831P-201ENST00000384548 107 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 MIR32-201ENST00000384965 70 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 U8.13-201ENST00000390842 128 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.01□□□□□ -2.09
PRPF39Q86UA1 MIR1283-1-201ENST00000408494 87 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.01□□□□□ -2.09
PRPF39Q86UA1 AL139396.1-201ENST00000421137 167 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 EIF1P1-201ENST00000421436 341 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 AL358453.1-201ENST00000422522 250 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.01□□□□□ -2.09
PRPF39Q86UA1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.01□□□□□ -2.09
PRPF39Q86UA1 MTCO3P8-201ENST00000453691 755 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 AC010531.2-201ENST00000465012 153 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 AC114982.1-201ENST00000469402 321 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 RNA5SP182-201ENST00000516064 82 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 RNU1-54P-201ENST00000517181 120 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.01□□□□□ -2.09
PRPF39Q86UA1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.01□□□□□ -2.09
PRPF39Q86UA1 MIR4713-201ENST00000582691 75 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 AC011494.1-201ENST00000596454 237 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 BNIP3P10-201ENST00000605360 577 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 ZNF204P-201ENST00000416749 2397 ntBASIC2.01□□□□□ -2.09
PRPF39Q86UA1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
PRPF39Q86UA1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2□□□□□ -2.09
PRPF39Q86UA1 ZNF72P-201ENST00000425869 1908 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 SNORA26.9-201ENST00000391322 122 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2□□□□□ -2.09
PRPF39Q86UA1 AC009237.7-201ENST00000447357 229 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 AC074290.1-201ENST00000448883 135 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 AC079354.2-201ENST00000453523 154 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 AC011352.1-201ENST00000512300 793 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2□□□□□ -2.09
PRPF39Q86UA1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2□□□□□ -2.09
PRPF39Q86UA1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
PRPF39Q86UA1 B3GNTL1P2-201ENST00000603673 288 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 AL353997.5-201ENST00000618886 171 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 KPNA2P1-201ENST00000458289 1591 ntBASIC2□□□□□ -2.09
PRPF39Q86UA1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 RNU6-418P-201ENST00000384035 107 ntBASIC1.99□□□□□ -2.09
PRPF39Q86UA1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 MTATP6P13-201ENST00000438531 667 ntBASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AC007677.1-201ENST00000445757 515 ntBASIC1.99□□□□□ -2.09
PRPF39Q86UA1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AC007215.1-201ENST00000464893 276 ntBASIC1.99□□□□□ -2.09
PRPF39Q86UA1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 RRN3P3-201ENST00000549207 578 ntBASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 MIR5094-201ENST00000578766 85 ntBASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.99□□□□□ -2.09
PRPF39Q86UA1 AC007014.2-201ENST00000615581 479 ntBASIC1.99□□□□□ -2.09
PRPF39Q86UA1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PRPF39Q86UA1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRPF39Q86UA1 MIR340-201ENST00000362125 95 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 Y_RNA.86-201ENST00000363020 111 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RNU6-541P-201ENST00000384709 110 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RNU6-192P-201ENST00000391253 100 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 AL033519.2-201ENST00000403958 392 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 AL445685.2-201ENST00000422551 342 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.98□□□□□ -2.09
PRPF39Q86UA1 HMGB1P18-201ENST00000438801 619 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.98□□□□□ -2.09
PRPF39Q86UA1 MTCO1P44-201ENST00000441935 243 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 AL357134.1-201ENST00000445848 426 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 NFU1P2-201ENST00000448700 469 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 FO393415.2-201ENST00000480085 343 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RPS29P25-201ENST00000481709 171 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RNU4-49P-201ENST00000516080 140 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RNU6-566P-201ENST00000516790 107 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RNU6-1088P-201ENST00000516850 104 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RNU6-1198P-201ENST00000516904 67 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RNA5SP54-201ENST00000516951 92 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 RNA5SP454-201ENST00000517231 127 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.98□□□□□ -2.09
PRPF39Q86UA1 MIR4790-201ENST00000577799 79 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 MIR6128-201ENST00000615528 109 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 AC002553.4-201ENST00000616896 331 ntBASIC1.98□□□□□ -2.09
PRPF39Q86UA1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.98□□□□□ -2.09
PRPF39Q86UA1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PRPF39Q86UA1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms