Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNU6-875P-201ENST00000516488 106 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 RNU6-58P-201ENST00000517143 103 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 AC087441.2-201ENST00000529141 262 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 AC025253.1-201ENST00000613623 543 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
LDB1Q86U70 RN7SL853P-201ENST00000617250 223 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.07□□□□□ -2.08
LDB1Q86U70 AL359757.2-201ENST00000624309 274 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
LDB1Q86U70 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.06□□□□□ -2.08
LDB1Q86U70 RNU6-1164P-201ENST00000364428 107 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 Y_RNA.404-201ENST00000383978 102 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 Y_RNA.405-201ENST00000383979 100 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 RNU6-245P-201ENST00000384020 107 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 Y_RNA.451-201ENST00000384200 100 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 SNORA70B-201ENST00000384210 135 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 Y_RNA.524-201ENST00000384564 100 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 RNU6-160P-201ENST00000384591 107 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 Y_RNA.561-201ENST00000384694 100 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 MIR549A-201ENST00000385268 96 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 MTCO3P8-201ENST00000453691 755 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.06□□□□□ -2.08
LDB1Q86U70 AC016925.1-201ENST00000458303 298 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 AC055731.1-201ENST00000474387 401 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 Y_RNA.702-201ENST00000516843 96 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 AC134698.4-201ENST00000523451 826 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 AC027288.2-201ENST00000553028 243 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.06□□□□□ -2.08
LDB1Q86U70 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 MIR5690-201ENST00000583739 73 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 SNRPGP19-201ENST00000603826 189 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 AC100812.1-201ENST00000607622 580 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.06□□□□□ -2.08
LDB1Q86U70 AC092794.2-201ENST00000620933 563 ntBASIC2.06□□□□□ -2.08
LDB1Q86U70 U8.2-201ENST00000363156 134 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 RNU6-331P-201ENST00000384724 107 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 RNU6-1009P-201ENST00000390996 107 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 MIR300-201ENST00000401138 83 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 RN7SKP223-201ENST00000410582 62 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 RNU6-370P-201ENST00000411008 104 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LDB1Q86U70 SNRPEP8-201ENST00000442866 260 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 AC007395.1-201ENST00000451333 677 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.05□□□□□ -2.08
LDB1Q86U70 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.05□□□□□ -2.08
LDB1Q86U70 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.05□□□□□ -2.08
LDB1Q86U70 RNA5SP384-201ENST00000516615 116 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 Y_RNA.706-201ENST00000516933 99 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.05□□□□□ -2.08
LDB1Q86U70 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.05□□□□□ -2.08
LDB1Q86U70 AC007229.1-201ENST00000590455 412 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 AC005014.2-201ENST00000607795 599 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 AL669831.3-213ENST00000636676 183 ntBASIC2.05□□□□□ -2.08
LDB1Q86U70 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LDB1Q86U70 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
LDB1Q86U70 RNU1-58P-201ENST00000362413 163 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 RNY1P16-201ENST00000363063 111 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 Y_RNA.132-201ENST00000363421 102 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 RNU6-1188P-201ENST00000363795 107 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 RNU6-700P-201ENST00000391043 107 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 RNA5SP465-201ENST00000391195 109 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.04□□□□□ -2.08
LDB1Q86U70 DPH3P2-201ENST00000422618 250 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.04□□□□□ -2.08
LDB1Q86U70 BX510359.4-201ENST00000423750 193 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 MTCO3P29-201ENST00000432119 779 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LDB1Q86U70 AC093019.1-201ENST00000443135 252 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.04□□□□□ -2.08
LDB1Q86U70 RNU6-559P-201ENST00000516151 98 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.04□□□□□ -2.08
LDB1Q86U70 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.04□□□□□ -2.08
LDB1Q86U70 IGKV3-31-201ENST00000523109 329 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 LINC02555-201ENST00000563933 1951 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 MIR5701-3-201ENST00000578890 82 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 MIR5701-1-201ENST00000585138 82 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 AL355802.3-201ENST00000607571 545 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.04□□□□□ -2.08
LDB1Q86U70 AL132765.2-201ENST00000610812 351 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 MIR5701-2-201ENST00000615634 82 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 AC104260.1-201ENST00000616660 539 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 AC130454.1-201ENST00000622948 401 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 AP000553.5-201ENST00000641933 54 ntBASIC2.04□□□□□ -2.08
LDB1Q86U70 RNU6-545P-201ENST00000362681 104 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 RNU5F-3P-201ENST00000363767 117 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 RNU6-280P-201ENST00000364145 104 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 RNU11-3P-201ENST00000391111 133 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 AL355497.1-201ENST00000406262 551 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 MIR1283-1-201ENST00000408494 87 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 MIR1283-2-201ENST00000408621 87 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 MTCYBP10-201ENST00000424905 650 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms