Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AC034114.1-201ENST00000520293 285 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 AL117187.1-201ENST00000555482 181 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RNF180Q86T96 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
RNF180Q86T96 AC125232.2-201ENST00000592457 143 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 AC023043.3-201ENST00000593113 385 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 SNORD11B-201ENST00000607707 90 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RNF180Q86T96 AL078596.1-201ENST00000624856 447 ntBASIC3.15□□□□□ -1.91
RNF180Q86T96 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF180Q86T96 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RNF180Q86T96 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF180Q86T96 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF180Q86T96 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF180Q86T96 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RNF180Q86T96 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF180Q86T96 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF180Q86T96 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF180Q86T96 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF180Q86T96 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RNF180Q86T96 Y_RNA.133-201ENST00000363428 110 ntBASIC3.14□□□□□ -1.91
RNF180Q86T96 SNORA70B-201ENST00000384210 135 ntBASIC3.14□□□□□ -1.91
RNF180Q86T96 Y_RNA.471-201ENST00000384312 102 ntBASIC3.14□□□□□ -1.91
RNF180Q86T96 RNU6-1026P-201ENST00000384465 108 ntBASIC3.14□□□□□ -1.91
RNF180Q86T96 RNA5SP213-201ENST00000391031 106 ntBASIC3.14□□□□□ -1.91
RNF180Q86T96 SNORD12B-201ENST00000410433 91 ntBASIC3.14□□□□□ -1.91
RNF180Q86T96 RNA5SP21-201ENST00000410917 96 ntBASIC3.14□□□□□ -1.91
RNF180Q86T96 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF180Q86T96 AC007395.1-201ENST00000451333 677 ntBASIC3.14□□□□□ -1.91
RNF180Q86T96 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF180Q86T96 Y_RNA.772-201ENST00000606692 102 ntBASIC3.14□□□□□ -1.91
RNF180Q86T96 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF180Q86T96 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF180Q86T96 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.14□□□□□ -1.91
RNF180Q86T96 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF180Q86T96 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RNF180Q86T96 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF180Q86T96 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF180Q86T96 RNA5SP68-201ENST00000363885 119 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 RNU6-944P-201ENST00000364023 107 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 RNU1-112P-201ENST00000364401 164 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 MIR548F4-201ENST00000408515 105 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 RNU2-32P-201ENST00000411193 191 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 RN7SL633P-201ENST00000488974 297 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 AC008413.1-201ENST00000511864 177 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 AC068657.1-201ENST00000520807 306 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 AC022616.8-201ENST00000533569 253 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF180Q86T96 AC090616.3-201ENST00000582184 217 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 U6.92-201ENST00000636464 89 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 MTND5P35-201ENST00000557537 1720 ntBASIC3.13□□□□□ -1.91
RNF180Q86T96 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
RNF180Q86T96 RNA5SP361-201ENST00000362686 118 ntBASIC3.12□□□□□ -1.91
RNF180Q86T96 Y_RNA.153-201ENST00000363615 91 ntBASIC3.12□□□□□ -1.91
RNF180Q86T96 RNU6-234P-201ENST00000365229 104 ntBASIC3.12□□□□□ -1.91
RNF180Q86T96 MIR549A-201ENST00000385268 96 ntBASIC3.12□□□□□ -1.91
RNF180Q86T96 AC104389.3-201ENST00000445629 235 ntBASIC3.12□□□□□ -1.91
RNF180Q86T96 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF180Q86T96 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF180Q86T96 RNU6-56P-201ENST00000516986 93 ntBASIC3.12□□□□□ -1.91
RNF180Q86T96 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.12□□□□□ -1.91
RNF180Q86T96 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.12□□□□□ -1.91
RNF180Q86T96 AL021879.1-201ENST00000611756 288 ntBASIC3.12□□□□□ -1.91
RNF180Q86T96 MIR6817-201ENST00000615588 66 ntBASIC3.12□□□□□ -1.91
RNF180Q86T96 U4atac.1-201ENST00000618345 95 ntBASIC3.12□□□□□ -1.91
RNF180Q86T96 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF180Q86T96 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF180Q86T96 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF180Q86T96 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RNF180Q86T96 RNU6-1309P-201ENST00000363305 108 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 Y_RNA.439-201ENST00000384119 94 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 RNU6-1145P-201ENST00000384246 107 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 MIR329-1-201ENST00000385028 80 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 AL357139.1-201ENST00000407792 426 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF180Q86T96 AC010095.1-201ENST00000443543 144 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 IFNA11P-201ENST00000446352 526 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 UQCRBP2-201ENST00000447827 297 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 AC074290.1-201ENST00000448883 135 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 AC096725.1-201ENST00000514266 313 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 RNU6-1012P-201ENST00000516606 109 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 SNORA40.15-201ENST00000516884 107 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
RNF180Q86T96 AC023824.2-201ENST00000566185 400 ntBASIC3.11□□□□□ -1.91
RNF180Q86T96 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF180Q86T96 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RNF180Q86T96 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
RNF180Q86T96 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF180Q86T96 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF180Q86T96 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RNF180Q86T96 RNU6-318P-201ENST00000384283 103 ntBASIC3.1□□□□□ -1.91
RNF180Q86T96 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
RNF180Q86T96 AL033519.2-201ENST00000403958 392 ntBASIC3.1□□□□□ -1.91
RNF180Q86T96 MRPL35P1-201ENST00000404272 572 ntBASIC3.1□□□□□ -1.91
RNF180Q86T96 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF180Q86T96 AC073910.1-201ENST00000445047 438 ntBASIC3.1□□□□□ -1.91
RNF180Q86T96 PCNPP5-201ENST00000452246 481 ntBASIC3.1□□□□□ -1.91
RNF180Q86T96 MTATP8P1-201ENST00000467115 207 ntBASIC3.1□□□□□ -1.91
RNF180Q86T96 AC091179.3-201ENST00000474761 144 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms