Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.29□□□□□ -1.88
OTOP1Q7RTM1 BX322639.1-202ENST00000423987 2213 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 AC026241.1-201ENST00000517873 2142 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 U3.9-201ENST00000363823 204 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 SNORA9.2-201ENST00000365361 133 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 RNU6-245P-201ENST00000384020 107 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 Y_RNA.447-201ENST00000384184 113 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 RNU6-1145P-201ENST00000384246 107 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 MIR329-1-201ENST00000385028 80 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 Y_RNA.602-201ENST00000410535 92 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 RPL39P38-201ENST00000467018 153 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 RPS29P21-201ENST00000496272 170 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 Y_RNA.683-201ENST00000516508 93 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 RNA5SP148-201ENST00000516527 94 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
OTOP1Q7RTM1 AP003122.5-201ENST00000527668 3766 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 AL021368.2-201ENST00000606125 5352 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 snoU2_19.1-201ENST00000362361 80 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 Y_RNA.84-201ENST00000363011 104 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 MIR549A-201ENST00000385268 96 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 IFNA11P-201ENST00000446352 526 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 AC145146.1-201ENST00000496370 254 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 SNORA31.6-201ENST00000516241 130 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 CYCSP23-201ENST00000519781 313 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 EIF4A1P12-201ENST00000551910 141 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 AC103810.1-201ENST00000579873 453 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 PCGEM1.1-201ENST00000613431 131 ntBASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
OTOP1Q7RTM1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 AC093831.2-201ENST00000624393 3427 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 AC069528.2-201ENST00000624849 1991 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 Y_RNA.14-201ENST00000362415 103 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 RNU6-486P-201ENST00000363116 107 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 SNORD113-8-201ENST00000363497 74 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 RNU6-379P-201ENST00000363813 104 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 RNU1-112P-201ENST00000364401 164 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 RNU6-793P-201ENST00000384233 104 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 MIR215-201ENST00000384858 110 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 RNU6-1203P-201ENST00000410703 110 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 RNU5A-5P-201ENST00000411054 116 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 UQCRBP2-201ENST00000447827 297 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 RN7SL75P-201ENST00000461926 281 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 AC103975.1-201ENST00000482506 483 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 RPL23AP70-201ENST00000483361 460 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 SNORA40.9-201ENST00000515895 93 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 AC015712.3-201ENST00000559380 164 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 AC026470.2-201ENST00000561492 181 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 AC008739.2-201ENST00000597006 317 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 MTND5P35-201ENST00000557537 1720 ntBASIC3.26□□□□□ -1.89
OTOP1Q7RTM1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 AC091564.4-201ENST00000533934 2194 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 AL391987.6-201ENST00000305671 199 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 RNU4-15P-201ENST00000362613 141 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 Y_RNA.238-201ENST00000364441 102 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 RNU6-21P-201ENST00000384710 107 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 MIR764-201ENST00000390811 85 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 AL138827.1-201ENST00000402666 306 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 AC005002.2-201ENST00000438228 269 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 RPS27P29-201ENST00000463110 252 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 RNU6-991P-201ENST00000516168 107 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 RNU6-794P-201ENST00000517261 64 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 HSPE1P18-201ENST00000517602 280 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 AC005357.1-201ENST00000588399 301 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 SDR42E1P4-201ENST00000620894 481 ntBASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.25□□□□□ -1.89
OTOP1Q7RTM1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.24□□□□□ -1.89
OTOP1Q7RTM1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
OTOP1Q7RTM1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
OTOP1Q7RTM1 SNORD81.1-201ENST00000363064 77 ntBASIC3.24□□□□□ -1.89
OTOP1Q7RTM1 RNU6-626P-201ENST00000363354 107 ntBASIC3.24□□□□□ -1.89
OTOP1Q7RTM1 SNORA20.1-201ENST00000364790 130 ntBASIC3.24□□□□□ -1.89
OTOP1Q7RTM1 SNORD63-201ENST00000384262 68 ntBASIC3.24□□□□□ -1.89
OTOP1Q7RTM1 Y_RNA.462-201ENST00000384268 102 ntBASIC3.24□□□□□ -1.89
OTOP1Q7RTM1 AL512633.1-201ENST00000399931 655 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms