Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COLCA1Q6ZS62 AC002543.1-201ENST00000299783 1954 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.53□□□□□ -2
COLCA1Q6ZS62 MIR422A-201ENST00000362286 90 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 RNU6-1266P-201ENST00000362794 105 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 Y_RNA.269-201ENST00000364685 89 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 RNU6-290P-201ENST00000365212 101 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 SNORA9.2-201ENST00000365361 133 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 Y_RNA.515-201ENST00000384535 112 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 Y_RNA.570-201ENST00000384750 101 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 RNU6-750P-201ENST00000390946 107 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 AC138623.1-201ENST00000418060 216 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.53□□□□□ -2
COLCA1Q6ZS62 AIMP1P2-201ENST00000425294 312 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.53□□□□□ -2
COLCA1Q6ZS62 AC010095.1-201ENST00000443543 144 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 AC007215.1-201ENST00000464893 276 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 AP004217.1-201ENST00000480579 346 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 SERF1AP1-201ENST00000514575 187 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 SNORA40.9-201ENST00000515895 93 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.53□□□□□ -2
COLCA1Q6ZS62 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.53□□□□□ -2
COLCA1Q6ZS62 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.53□□□□□ -2
COLCA1Q6ZS62 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.53□□□□□ -2
COLCA1Q6ZS62 AC090115.4-201ENST00000609970 188 ntBASIC2.53□□□□□ -2
COLCA1Q6ZS62 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.53□□□□□ -2
COLCA1Q6ZS62 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.53□□□□□ -2
COLCA1Q6ZS62 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
COLCA1Q6ZS62 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 RNU1-35P-201ENST00000362782 153 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 RNU6-626P-201ENST00000363354 107 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 Y_RNA.274-201ENST00000364714 101 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 RNU6-20P-201ENST00000384106 107 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 SNORA48.2-201ENST00000390926 124 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 SNORA48.5-201ENST00000391143 135 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 AL139156.1-201ENST00000412785 841 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 AC112220.1-201ENST00000434628 355 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 RPS29P6-201ENST00000438196 145 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 snoU13.14-201ENST00000459372 104 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 RPL31P41-201ENST00000477967 372 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 AK6P2-201ENST00000549020 471 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 AL391813.1-201ENST00000603098 260 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 MZT1P2-201ENST00000604387 248 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 AL138963.2-201ENST00000605137 226 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 AC005520.5-201ENST00000613926 164 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 U2.14-201ENST00000615943 113 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.52□□□□□ -2.01
COLCA1Q6ZS62 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 RNU6-1010P-201ENST00000362757 107 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 Y_RNA.54-201ENST00000362766 105 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 RNU4-90P-201ENST00000362773 141 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 Y_RNA.65-201ENST00000362846 100 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 Y_RNA.76-201ENST00000362931 109 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 RNA5SP393-201ENST00000363423 117 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 Y_RNA.446-201ENST00000384178 104 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 MIR128-1-201ENST00000384921 82 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 RNA5SP201-201ENST00000410316 124 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 Z92545.1-201ENST00000411782 234 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AL451074.5-201ENST00000415894 435 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AC012308.1-201ENST00000451232 178 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AC083906.5-201ENST00000503722 328 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 RNA5SP341-201ENST00000516261 117 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 RRN3P3-201ENST00000549207 578 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 MIR4325-201ENST00000583049 90 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 AC005000.2-201ENST00000605468 310 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 RNU6-91P-201ENST00000607774 107 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 FO624990.1-201ENST00000636373 85 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 ZNF204P-201ENST00000416749 2397 ntBASIC2.51□□□□□ -2.01
COLCA1Q6ZS62 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 BX322639.1-202ENST00000423987 2213 ntBASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 RNU6-1159P-201ENST00000362933 107 ntBASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 RNU6-209P-201ENST00000384118 107 ntBASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 Y_RNA.785-201ENST00000384290 109 ntBASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 RNU6-378P-201ENST00000384324 107 ntBASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 U3.26-201ENST00000391236 204 ntBASIC2.5□□□□□ -2.01
COLCA1Q6ZS62 CBX3P9-201ENST00000402326 552 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms