Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 SNORA71.1-201ENST00000364523 117 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 MIR544A-201ENST00000384855 91 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 RNA5SP229-201ENST00000410809 99 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 RPL26P27-201ENST00000414397 437 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 MTATP6P7-201ENST00000453315 681 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 RPL26P9-201ENST00000457466 433 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 AL031183.1-201ENST00000457667 207 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-625P-201ENST00000459412 107 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 Y_RNA.637-201ENST00000459424 114 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-1198P-201ENST00000516904 67 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 AC018448.1-201ENST00000552843 316 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 AC004467.1-201ENST00000615678 330 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 AC091932.3-201ENST00000624223 323 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 AC000403.1-201ENST00000613696 3585 ntBASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CNKSR3Q6P9H4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 AC010332.2-201ENST00000613083 1904 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 RNA5SP322-201ENST00000363617 119 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 Y_RNA.218-201ENST00000364218 104 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 SNORA72.2-201ENST00000365028 127 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 RNU1-100P-201ENST00000365255 165 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 Y_RNA.357-201ENST00000365487 109 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 RNU1-73P-201ENST00000383971 164 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 Z98941.1-201ENST00000407764 100 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 ELOCP21-201ENST00000412558 336 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 AC112220.1-201ENST00000434628 355 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 RPL30P12-201ENST00000474666 353 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 AL121594.1-201ENST00000475906 575 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 SNORD59.2-201ENST00000516873 68 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 AP002001.1-203ENST00000534002 267 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 MIR3124-201ENST00000582636 67 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 AC019159.1-201ENST00000605094 187 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 uc_338.25-201ENST00000613756 156 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CNKSR3Q6P9H4 MTND5P35-201ENST00000557537 1720 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 MIR423-201ENST00000362201 94 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 Y_RNA.121-201ENST00000363309 113 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 Y_RNA.273-201ENST00000364703 102 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 RNU4-17P-201ENST00000365598 141 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-301P-201ENST00000384277 107 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 SNORA54-201ENST00000384281 123 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 MIR549A-201ENST00000385268 96 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 FTH1P15-201ENST00000406984 280 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 RN7SKP220-201ENST00000410611 288 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 RN7SKP61-201ENST00000410642 295 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 AL035461.1-201ENST00000421490 332 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 RAB28P5-201ENST00000427490 651 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 AC016632.1-201ENST00000503994 196 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-155P-201ENST00000516347 100 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 RNU7-121P-201ENST00000516604 62 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-971P-201ENST00000516920 106 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 SNORA31.23-201ENST00000517219 133 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 DEFB131C-201ENST00000528817 165 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 CR383656.8-201ENST00000549046 145 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 NACAP3-201ENST00000552100 481 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 MIR3684-201ENST00000579779 74 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 AC090616.3-201ENST00000582184 217 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 MIR6134-201ENST00000617606 109 ntBASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNKSR3Q6P9H4 AC068700.1-201ENST00000565862 3754 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 RNU6-239P-201ENST00000390990 99 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 RNU1-101P-201ENST00000391171 127 ntBASIC3.43□□□□□ -1.86
CNKSR3Q6P9H4 MTND4LP9-201ENST00000427694 174 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms