Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 AL139156.1-201ENST00000412785 841 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 AC078809.1-201ENST00000427601 140 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 WARS2P1-201ENST00000429678 537 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 AC010099.1-201ENST00000455434 375 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.55□□□□□ -2
ZNF549Q6P9A3 SNORD109B-201ENST00000458961 67 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 SNORD109A-201ENST00000459128 67 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 GZMAP1-201ENST00000503054 631 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 RN7SKP49-201ENST00000516675 260 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 AP000867.2-201ENST00000532468 320 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.55□□□□□ -2
ZNF549Q6P9A3 MIR3529-201ENST00000637713 78 ntBASIC2.55□□□□□ -2
ZNF549Q6P9A3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.55□□□□□ -2
ZNF549Q6P9A3 ADAM3A-203ENST00000461344 2157 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 AC091564.4-201ENST00000533934 2194 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.54□□□□□ -2
ZNF549Q6P9A3 RNU6-1266P-201ENST00000362794 105 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 RNU6-137P-201ENST00000363680 108 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 RNU6-879P-201ENST00000364328 108 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 Y_RNA.269-201ENST00000364685 89 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 Y_RNA.277-201ENST00000364754 102 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 DEFA7P-201ENST00000382676 285 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 RNU6-142P-201ENST00000384019 107 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
ZNF549Q6P9A3 SNORD12B-201ENST00000410433 91 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.54□□□□□ -2
ZNF549Q6P9A3 AL445305.1-201ENST00000432577 575 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.54□□□□□ -2
ZNF549Q6P9A3 GPM6BP3-201ENST00000442797 145 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.54□□□□□ -2
ZNF549Q6P9A3 snoU13.6-201ENST00000458785 104 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 snoU13.28-201ENST00000459235 104 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 AC016632.1-201ENST00000503994 196 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.54□□□□□ -2
ZNF549Q6P9A3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF549Q6P9A3 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
ZNF549Q6P9A3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF549Q6P9A3 RNU6-961P-201ENST00000363893 105 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 RNU6-290P-201ENST00000365212 101 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 RNA5SP390-201ENST00000410191 113 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 RPS26P42-201ENST00000413485 326 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 AC104332.2-201ENST00000429959 156 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 AC244670.1-201ENST00000436879 112 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 SNRPGP7-201ENST00000469016 106 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 RPL30P12-201ENST00000474666 353 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 SRIP1-201ENST00000489235 288 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 SERF1AP1-201ENST00000514575 187 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 SNORA31.16-201ENST00000516773 139 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 SCARNA24.2-201ENST00000516968 130 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 AC098479.1-201ENST00000609225 154 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 AL357075.2-201ENST00000614906 189 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 U2.14-201ENST00000615943 113 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 AC073308.1-201ENST00000623696 305 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.53□□□□□ -2
ZNF549Q6P9A3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ZNF549Q6P9A3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
ZNF549Q6P9A3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.53□□□□□ -2.01
ZNF549Q6P9A3 AC010680.1-201ENST00000590024 3590 ntBASIC2.53□□□□□ -2.01
ZNF549Q6P9A3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AC092268.1-201ENST00000342691 405 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 SNORA5B-201ENST00000363786 132 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AL358075.3-201ENST00000426289 226 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 RPL39P29-201ENST00000447779 157 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AC108938.1-201ENST00000451204 136 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AC073901.1-201ENST00000462471 408 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 RNU6-567P-201ENST00000516746 107 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.700-201ENST00000516806 100 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 MIR5695-201ENST00000579717 85 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AL356575.1-201ENST00000603008 283 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AC091152.3-201ENST00000604227 325 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AC005296.1-201ENST00000616145 209 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AC137590.2-201ENST00000619709 240 ntBASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF549Q6P9A3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
ZNF549Q6P9A3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms