Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC38Q502W7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.5□□□□□ -2.01
CCDC38Q502W7 SUB1P3-201ENST00000564581 315 ntBASIC2.5□□□□□ -2.01
CCDC38Q502W7 AC004584.2-201ENST00000570407 410 ntBASIC2.5□□□□□ -2.01
CCDC38Q502W7 AL117336.2-201ENST00000602435 335 ntBASIC2.5□□□□□ -2.01
CCDC38Q502W7 IGHVIII-44-202ENST00000636235 289 ntBASIC2.5□□□□□ -2.01
CCDC38Q502W7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.5□□□□□ -2.01
CCDC38Q502W7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC38Q502W7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC38Q502W7 MIRLET7G-201ENST00000362280 84 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 Y_RNA.106-201ENST00000363189 100 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 MIR27B-201ENST00000385129 97 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 RNU1-139P-201ENST00000391307 165 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 SNORD23.1-201ENST00000408212 104 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 USP9YP16-201ENST00000430287 407 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 AL109933.2-201ENST00000452651 260 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 USP9YP23-201ENST00000455085 407 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 SNORA25.14-201ENST00000516481 132 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 RNU6-344P-201ENST00000516635 111 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC38Q502W7 AC087441.2-201ENST00000529141 262 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 MIR3162-201ENST00000581818 82 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 MIR4795-201ENST00000584182 89 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
CCDC38Q502W7 AC084781.2-201ENST00000615568 161 ntBASIC2.49□□□□□ -2.01
CCDC38Q502W7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC38Q502W7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CCDC38Q502W7 ZNF658B-202ENST00000615961 3375 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 SNORD115-3-201ENST00000363100 82 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 RNU6-873P-201ENST00000363833 107 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 RNA5SP37-201ENST00000365420 130 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 Y_RNA.364-201ENST00000365532 101 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 MIR518A2-201ENST00000384966 87 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 AC004866.1-201ENST00000411748 78 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 AC022028.1-201ENST00000412054 408 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC38Q502W7 WARS2P1-201ENST00000429678 537 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 AC092423.1-201ENST00000430165 186 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC38Q502W7 RNU7-152P-201ENST00000458982 64 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 RNU6-470P-201ENST00000515954 104 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC38Q502W7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC38Q502W7 MIR4529-201ENST00000578110 78 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC38Q502W7 U4.3-201ENST00000621047 82 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 AC012640.5-201ENST00000623897 319 ntBASIC2.48□□□□□ -2.01
CCDC38Q502W7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC38Q502W7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC38Q502W7 RNU1-62P-201ENST00000362599 164 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 RNU6-545P-201ENST00000362681 104 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 RNU6-160P-201ENST00000384591 107 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 MIR10B-201ENST00000385011 110 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 MIR1283-1-201ENST00000408494 87 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 AC007395.1-201ENST00000451333 677 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC38Q502W7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.47□□□□□ -2.01
CCDC38Q502W7 Y_RNA.675-201ENST00000516389 149 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC38Q502W7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC38Q502W7 RRN3P3-201ENST00000549207 578 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC38Q502W7 UBL5P4-201ENST00000562584 236 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC38Q502W7 MIR4435-1-201ENST00000582552 80 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC38Q502W7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC38Q502W7 AC126177.8-201ENST00000618339 1015 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 MTND5P16-201ENST00000460269 1703 ntBASIC2.47□□□□□ -2.01
CCDC38Q502W7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC38Q502W7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC38Q502W7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC38Q502W7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC38Q502W7 RNU4-79P-201ENST00000362764 141 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 Y_RNA.58-201ENST00000362807 102 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 Y_RNA.132-201ENST00000363421 102 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 Y_RNA.154-201ENST00000363624 102 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 Y_RNA.187-201ENST00000363918 113 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 RNU6-99P-201ENST00000364721 107 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 RNY3P1-201ENST00000365085 102 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 RNY3-201ENST00000365484 102 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CCDC38Q502W7 MIR518C-201ENST00000384822 101 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 AL513328.1-201ENST00000446460 224 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 AC079804.2-201ENST00000490376 200 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 RNA5SP148-201ENST00000516527 94 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 AC090617.3-201ENST00000573670 475 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 MIR4753-201ENST00000585119 83 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CCDC38Q502W7 SNORD11B-201ENST00000607707 90 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 MIR6817-201ENST00000615588 66 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 MTND5P10-201ENST00000603719 1809 ntBASIC2.46□□□□□ -2.02
CCDC38Q502W7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC38Q502W7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC38Q502W7 LINC02555-201ENST00000563933 1951 ntBASIC2.45□□□□□ -2.02
CCDC38Q502W7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms