Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 Y_RNA.329-201ENST00000365209 107 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 Y_RNA.563-201ENST00000384707 108 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 MIR586-201ENST00000385035 97 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 SNORD17-201ENST00000390930 237 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 AC006989.1-201ENST00000427212 131 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 RN7SL594P-201ENST00000470590 287 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 AC005840.1-201ENST00000498412 377 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.92□□□□□ -1.78
ECM1Q16610 RNU6-1234P-201ENST00000516877 103 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 AP002001.1-203ENST00000534002 267 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 MIR5692C2-201ENST00000577959 77 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 AC006254.2-201ENST00000603259 279 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 SNORA51-201ENST00000606420 132 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 Y_RNA.778-201ENST00000620203 90 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 AC022149.2-201ENST00000621061 203 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 AC110079.1-202ENST00000635213 138 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
ECM1Q16610 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ECM1Q16610 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.92□□□□□ -1.78
ECM1Q16610 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
ECM1Q16610 AC010329.5-201ENST00000623497 2174 ntBASIC3.92□□□□□ -1.78
ECM1Q16610 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ECM1Q16610 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ECM1Q16610 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
ECM1Q16610 RNU6-151P-201ENST00000364158 107 ntBASIC3.91□□□□□ -1.78
ECM1Q16610 RNU6-429P-201ENST00000384582 108 ntBASIC3.91□□□□□ -1.78
ECM1Q16610 MIR490-201ENST00000384865 128 ntBASIC3.91□□□□□ -1.78
ECM1Q16610 RNU6-1199P-201ENST00000411249 104 ntBASIC3.91□□□□□ -1.78
ECM1Q16610 MIR2114-201ENST00000516645 80 ntBASIC3.91□□□□□ -1.78
ECM1Q16610 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.91□□□□□ -1.78
ECM1Q16610 MIR548X2-201ENST00000579776 100 ntBASIC3.91□□□□□ -1.78
ECM1Q16610 AL008718.3-201ENST00000610217 321 ntBASIC3.91□□□□□ -1.78
ECM1Q16610 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ECM1Q16610 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ECM1Q16610 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ECM1Q16610 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.9□□□□□ -1.78
ECM1Q16610 SNORA71.3-201ENST00000362582 128 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 RNU4-35P-201ENST00000362588 141 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 RNU6-1305P-201ENST00000364353 104 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 RNU6-755P-201ENST00000364400 103 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 SNORD87-201ENST00000364849 89 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 MIR449B-201ENST00000384995 97 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.9□□□□□ -1.79
ECM1Q16610 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 AC093578.1-201ENST00000415219 368 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.9□□□□□ -1.79
ECM1Q16610 SEM1P1-201ENST00000506694 209 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 RNU6-436P-201ENST00000516171 114 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 DEFB117-201ENST00000602356 141 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 AC008739.3-201ENST00000603262 127 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 AL133393.1-201ENST00000603277 287 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 AP003355.3-201ENST00000623465 114 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 AC008873.1-201ENST00000625051 138 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ECM1Q16610 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.9□□□□□ -1.79
ECM1Q16610 AC110774.1-201ENST00000623567 2018 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 AL391516.1-201ENST00000554380 2449 ntBASIC3.9□□□□□ -1.79
ECM1Q16610 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.89□□□□□ -1.79
ECM1Q16610 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ECM1Q16610 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.89□□□□□ -1.79
ECM1Q16610 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ECM1Q16610 AC103988.1-201ENST00000566382 2177 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
ECM1Q16610 Y_RNA.23-201ENST00000362496 106 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 SNORD32B-201ENST00000364460 84 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 RNU6-211P-201ENST00000384047 107 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 Y_RNA.571-201ENST00000384753 98 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 MIR1183-201ENST00000408856 89 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 RN7SKP111-201ENST00000410349 271 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.89□□□□□ -1.79
ECM1Q16610 AC009414.1-201ENST00000427200 443 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 RPS4XP2-201ENST00000458402 793 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.89□□□□□ -1.79
ECM1Q16610 RNU7-121P-201ENST00000516604 62 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.89□□□□□ -1.79
ECM1Q16610 AC127455.1-201ENST00000565496 145 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 MIR4753-201ENST00000585119 83 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 snoU18.1-201ENST00000629629 71 ntBASIC3.89□□□□□ -1.79
ECM1Q16610 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.89□□□□□ -1.79
ECM1Q16610 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ECM1Q16610 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ECM1Q16610 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
ECM1Q16610 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.88□□□□□ -1.79
ECM1Q16610 Z82209.1-201ENST00000422141 2135 ntBASIC3.88□□□□□ -1.79
ECM1Q16610 RNU6-1056P-201ENST00000383996 107 ntBASIC3.88□□□□□ -1.79
ECM1Q16610 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.88□□□□□ -1.79
ECM1Q16610 RPS29P4-201ENST00000414733 161 ntBASIC3.88□□□□□ -1.79
ECM1Q16610 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.88□□□□□ -1.79
ECM1Q16610 MICF-203ENST00000432679 129 ntBASIC3.88□□□□□ -1.79
ECM1Q16610 RNU2-27P-201ENST00000516185 142 ntBASIC3.88□□□□□ -1.79
ECM1Q16610 IGKV2-26-201ENST00000518305 343 ntBASIC3.88□□□□□ -1.79
ECM1Q16610 SUMO2P18-201ENST00000518873 252 ntBASIC3.88□□□□□ -1.79
ECM1Q16610 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.88□□□□□ -1.79
ECM1Q16610 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.88□□□□□ -1.79
ECM1Q16610 MIR3145-201ENST00000580727 82 ntBASIC3.88□□□□□ -1.79
ECM1Q16610 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.88□□□□□ -1.79
ECM1Q16610 XIST_intron.1-201ENST00000619444 68 ntBASIC3.88□□□□□ -1.79
ECM1Q16610 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ECM1Q16610 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms