Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
USF2Q15853 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.62□□□□□ -2.31
USF2Q15853 AC004386.2-201ENST00000441858 148 ntBASIC0.62□□□□□ -2.31
USF2Q15853 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.62□□□□□ -2.31
USF2Q15853 RNU6-410P-201ENST00000517006 107 ntBASIC0.62□□□□□ -2.31
USF2Q15853 AC090572.1-201ENST00000519251 160 ntBASIC0.62□□□□□ -2.31
USF2Q15853 MIR3973-201ENST00000579824 107 ntBASIC0.62□□□□□ -2.31
USF2Q15853 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.62□□□□□ -2.31
USF2Q15853 AC091304.9-201ENST00000612091 226 ntBASIC0.62□□□□□ -2.31
USF2Q15853 MIR6788-201ENST00000618842 66 ntBASIC0.62□□□□□ -2.31
USF2Q15853 AL359697.1-201ENST00000624879 587 ntBASIC0.62□□□□□ -2.31
USF2Q15853 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
USF2Q15853 RNU6-393P-201ENST00000384475 107 ntBASIC0.61□□□□□ -2.31
USF2Q15853 RNU11-5P-201ENST00000391216 129 ntBASIC0.61□□□□□ -2.31
USF2Q15853 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
USF2Q15853 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.61□□□□□ -2.31
USF2Q15853 SSR1P2-201ENST00000415208 787 ntBASIC0.61□□□□□ -2.31
USF2Q15853 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.61□□□□□ -2.31
USF2Q15853 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.61□□□□□ -2.31
USF2Q15853 CETN4P-201ENST00000432407 469 ntBASIC0.61□□□□□ -2.31
USF2Q15853 AC004854.1-201ENST00000440356 349 ntBASIC0.61□□□□□ -2.31
USF2Q15853 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.61□□□□□ -2.31
USF2Q15853 EPS15P1-201ENST00000448836 336 ntBASIC0.61□□□□□ -2.31
USF2Q15853 Vault.3-201ENST00000516676 95 ntBASIC0.61□□□□□ -2.31
USF2Q15853 RNU1-142P-201ENST00000516682 145 ntBASIC0.61□□□□□ -2.31
USF2Q15853 RNU6-1223P-201ENST00000517124 104 ntBASIC0.61□□□□□ -2.31
USF2Q15853 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.61□□□□□ -2.31
USF2Q15853 AC146944.4-201ENST00000602697 718 ntBASIC0.61□□□□□ -2.31
USF2Q15853 AC104465.1-201ENST00000611365 139 ntBASIC0.61□□□□□ -2.31
USF2Q15853 MIR6767-201ENST00000637302 66 ntBASIC0.61□□□□□ -2.31
USF2Q15853 MIR6866-201ENST00000638146 69 ntBASIC0.61□□□□□ -2.31
USF2Q15853 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.61□□□□□ -2.31
USF2Q15853 RNU6-969P-201ENST00000383900 105 ntBASIC0.6□□□□□ -2.31
USF2Q15853 SNORA80D-201ENST00000384488 135 ntBASIC0.6□□□□□ -2.31
USF2Q15853 MIR548J-201ENST00000408833 112 ntBASIC0.6□□□□□ -2.31
USF2Q15853 RNU6-57P-201ENST00000411348 103 ntBASIC0.6□□□□□ -2.31
USF2Q15853 MTCO2P8-201ENST00000412213 658 ntBASIC0.6□□□□□ -2.31
USF2Q15853 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
USF2Q15853 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.6□□□□□ -2.31
USF2Q15853 AL596276.1-201ENST00000434465 418 ntBASIC0.6□□□□□ -2.31
USF2Q15853 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.6□□□□□ -2.31
USF2Q15853 NFU1P2-201ENST00000448700 469 ntBASIC0.6□□□□□ -2.31
USF2Q15853 ZNF114P1-201ENST00000453500 292 ntBASIC0.6□□□□□ -2.31
USF2Q15853 SRRM1P2-201ENST00000464531 1192 ntBASIC0.6□□□□□ -2.31
USF2Q15853 HMGB1P29-201ENST00000505659 499 ntBASIC0.6□□□□□ -2.31
USF2Q15853 RNU2-46P-201ENST00000517038 113 ntBASIC0.6□□□□□ -2.31
USF2Q15853 SNORA25.17-201ENST00000517184 124 ntBASIC0.6□□□□□ -2.31
USF2Q15853 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.6□□□□□ -2.31
USF2Q15853 ELOCP32-201ENST00000548625 324 ntBASIC0.6□□□□□ -2.31
USF2Q15853 AL137100.2-201ENST00000555786 315 ntBASIC0.6□□□□□ -2.31
USF2Q15853 AL391840.1-201ENST00000571144 367 ntBASIC0.6□□□□□ -2.31
USF2Q15853 RSL24D1P11-201ENST00000591045 491 ntBASIC0.6□□□□□ -2.31
USF2Q15853 AC080078.2-201ENST00000603766 501 ntBASIC0.6□□□□□ -2.31
USF2Q15853 MIR7844-201ENST00000616161 122 ntBASIC0.6□□□□□ -2.31
USF2Q15853 MIR8054-201ENST00000620877 86 ntBASIC0.6□□□□□ -2.31
USF2Q15853 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.6□□□□□ -2.31
USF2Q15853 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
USF2Q15853 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
USF2Q15853 AC009541.1-201ENST00000438279 2662 ntBASIC0.59□□□□□ -2.31
USF2Q15853 RNU4-76P-201ENST00000364509 141 ntBASIC0.59□□□□□ -2.31
USF2Q15853 RNU6-434P-201ENST00000384376 107 ntBASIC0.59□□□□□ -2.31
USF2Q15853 SNORD70.1-201ENST00000391007 85 ntBASIC0.59□□□□□ -2.31
USF2Q15853 RNU4-46P-201ENST00000410818 138 ntBASIC0.59□□□□□ -2.31
USF2Q15853 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.59□□□□□ -2.31
USF2Q15853 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.59□□□□□ -2.31
USF2Q15853 AC079781.2-201ENST00000446424 169 ntBASIC0.59□□□□□ -2.31
USF2Q15853 BET1P1-201ENST00000482276 359 ntBASIC0.59□□□□□ -2.31
USF2Q15853 AP003072.2-201ENST00000527756 676 ntBASIC0.59□□□□□ -2.31
USF2Q15853 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
USF2Q15853 AL390123.1-201ENST00000603216 237 ntBASIC0.59□□□□□ -2.31
USF2Q15853 AC022217.4-201ENST00000604389 163 ntBASIC0.59□□□□□ -2.31
USF2Q15853 AP000240.1-201ENST00000609910 452 ntBASIC0.59□□□□□ -2.31
USF2Q15853 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
USF2Q15853 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.59□□□□□ -2.31
USF2Q15853 RNU6-266P-201ENST00000364225 107 ntBASIC0.58□□□□□ -2.32
USF2Q15853 RNU6-1305P-201ENST00000364353 104 ntBASIC0.58□□□□□ -2.32
USF2Q15853 RNU6-1029P-201ENST00000384109 107 ntBASIC0.58□□□□□ -2.32
USF2Q15853 MIR454-201ENST00000390180 115 ntBASIC0.58□□□□□ -2.32
USF2Q15853 AL355796.1-201ENST00000406706 323 ntBASIC0.58□□□□□ -2.32
USF2Q15853 Y_RNA.598-201ENST00000410480 95 ntBASIC0.58□□□□□ -2.32
USF2Q15853 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.58□□□□□ -2.32
USF2Q15853 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.58□□□□□ -2.32
USF2Q15853 GPR143P-201ENST00000434155 205 ntBASIC0.58□□□□□ -2.32
USF2Q15853 AC005002.2-201ENST00000438228 269 ntBASIC0.58□□□□□ -2.32
USF2Q15853 AC074290.1-201ENST00000448883 135 ntBASIC0.58□□□□□ -2.32
USF2Q15853 RPS29P15-201ENST00000458329 171 ntBASIC0.58□□□□□ -2.32
USF2Q15853 RNU7-182P-201ENST00000459009 62 ntBASIC0.58□□□□□ -2.32
USF2Q15853 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.58□□□□□ -2.32
USF2Q15853 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.58□□□□□ -2.32
USF2Q15853 AC079140.5-201ENST00000507882 310 ntBASIC0.58□□□□□ -2.32
USF2Q15853 AC025465.4-201ENST00000513422 638 ntBASIC0.58□□□□□ -2.32
USF2Q15853 RNU2-69P-201ENST00000516061 100 ntBASIC0.58□□□□□ -2.32
USF2Q15853 RNA5SP255-201ENST00000516370 107 ntBASIC0.58□□□□□ -2.32
USF2Q15853 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
USF2Q15853 MIR4778-201ENST00000577635 80 ntBASIC0.58□□□□□ -2.32
USF2Q15853 MTATP6P3-201ENST00000581686 676 ntBASIC0.58□□□□□ -2.32
USF2Q15853 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.58□□□□□ -2.32
USF2Q15853 AC108706.1-201ENST00000611053 297 ntBASIC0.58□□□□□ -2.32
USF2Q15853 TCL6_2.1-201ENST00000615162 119 ntBASIC0.58□□□□□ -2.32
USF2Q15853 RMST_2.1-201ENST00000617263 136 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms