Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 Y_RNA.367-201ENST00000365544 101 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CACNA1SQ13698 snoU13.30-201ENST00000458951 104 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 RPS26P55-201ENST00000471178 356 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 AC010486.2-201ENST00000505572 483 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 SNORA14.1-201ENST00000516113 141 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 RNU6-1198P-201ENST00000516904 67 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 AC004812.1-201ENST00000540773 146 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 AL442163.3-201ENST00000554110 156 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 MIR4703-201ENST00000577728 79 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 BNIP3P39-201ENST00000601077 554 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 AC024933.1-201ENST00000608472 348 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 MIR8087-201ENST00000612745 78 ntBASIC0.83□□□□□ -2.28
CACNA1SQ13698 RNU6-1317P-201ENST00000364582 104 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 Y_RNA.399-201ENST00000383955 105 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 RNU6-245P-201ENST00000384020 107 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 MIR597-201ENST00000384968 97 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC092628.1-201ENST00000436250 252 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 RNU7-14P-201ENST00000459331 62 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 RPS29P27-201ENST00000463711 170 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC010531.2-201ENST00000465012 153 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC067942.3-201ENST00000512025 362 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 RNA5SP476-201ENST00000516613 103 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 SNORA18.6-201ENST00000516792 115 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 RNU6-1220P-201ENST00000517126 108 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.82□□□□□ -2.28
CACNA1SQ13698 MTCO3P23-201ENST00000561363 289 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC012414.6-201ENST00000568241 401 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC064872.1-201ENST00000604823 1072 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AL121992.2-201ENST00000606262 256 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 RNU6-23P-201ENST00000363283 107 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC013410.2-201ENST00000422627 201 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC099677.2-201ENST00000436385 175 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AL445567.1-201ENST00000439121 144 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC097473.1-201ENST00000508142 408 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC011406.1-201ENST00000512440 370 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 RNU6-759P-201ENST00000516740 103 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.82□□□□□ -2.28
CACNA1SQ13698 HMGB1P33-201ENST00000563485 527 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC091931.1-201ENST00000623488 728 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 AC009033.1-201ENST00000624279 431 ntBASIC0.82□□□□□ -2.28
CACNA1SQ13698 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CACNA1SQ13698 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CACNA1SQ13698 RNU6-45P-201ENST00000384471 107 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 AL161935.2-201ENST00000414627 60 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.81□□□□□ -2.28
CACNA1SQ13698 AC010975.2-201ENST00000427781 588 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 OR2AQ1P-201ENST00000451972 200 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 NDUFB4P10-201ENST00000452541 359 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.81□□□□□ -2.28
CACNA1SQ13698 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1SQ13698 AC090115.3-201ENST00000553218 849 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.81□□□□□ -2.28
CACNA1SQ13698 MIR5006-201ENST00000583027 110 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 MIR3976-201ENST00000606807 139 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 AL050303.3-201ENST00000613704 284 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 AC063943.3-201ENST00000615562 356 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 AC243829.3-201ENST00000622177 108 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 AC027335.2-201ENST00000624030 375 ntBASIC0.81□□□□□ -2.28
CACNA1SQ13698 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1SQ13698 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.81□□□□□ -2.28
CACNA1SQ13698 RNU6-1120P-201ENST00000362988 108 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 U3.9-201ENST00000363823 204 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 RNA5SP467-201ENST00000391274 118 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CACNA1SQ13698 MIR300-201ENST00000401138 83 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 MTCO2P11-201ENST00000431069 680 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 MTND5P15-201ENST00000434246 349 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 PGBD4P5-201ENST00000445958 426 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 RPS29P15-201ENST00000458329 171 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 AC114982.1-201ENST00000469402 321 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 MIR3913-1-201ENST00000577744 102 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 AP001836.1-201ENST00000604675 523 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 CTHRC1P1-201ENST00000605383 469 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 AL451064.1-201ENST00000607718 471 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 AP001596.2-201ENST00000608410 312 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
CACNA1SQ13698 snoU2-30.2-201ENST00000362805 70 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 RNU1-36P-201ENST00000365130 165 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 AL135790.2-201ENST00000437701 267 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 HSPE1P9-201ENST00000440046 311 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 AL163195.1-201ENST00000496941 348 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 MTND1P22-201ENST00000510572 951 ntBASIC0.8□□□□□ -2.28
CACNA1SQ13698 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1SQ13698 AL157687.1-201ENST00000554853 619 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms