Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC015688.6-201ENST00000577737 104 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 MIR5583-1-201ENST00000580941 59 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 HSPE1P19-201ENST00000603327 295 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 AL391646.1-201ENST00000603860 190 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 MIR8070-201ENST00000616510 88 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 MIR8063-201ENST00000621930 81 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 AC095038.3-201ENST00000634439 195 ntBASIC0.82□□□□□ -2.28
FOXF1Q12946 SNORA18.2-201ENST00000383865 132 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 SNORA75-201ENST00000384158 137 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 SNORA36A-201ENST00000384221 132 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 RNU6-1235P-201ENST00000384559 107 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 MIR222-201ENST00000384992 110 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 MIR1283-1-201ENST00000408494 87 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.81□□□□□ -2.28
FOXF1Q12946 RPS27P16-201ENST00000425758 201 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC073464.1-201ENST00000429823 534 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.81□□□□□ -2.28
FOXF1Q12946 RNU6-498P-201ENST00000459468 107 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC007215.1-201ENST00000464893 276 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.81□□□□□ -2.28
FOXF1Q12946 OR2A41P-201ENST00000473586 105 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC091885.1-201ENST00000506658 268 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC091133.4-201ENST00000511142 308 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 RNU6-189P-201ENST00000516120 101 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 SNORA40.12-201ENST00000516329 111 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 RNU6-1069P-201ENST00000516612 133 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.81□□□□□ -2.28
FOXF1Q12946 DEFB131C-201ENST00000528817 165 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.81□□□□□ -2.28
FOXF1Q12946 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.81□□□□□ -2.28
FOXF1Q12946 AC004223.2-201ENST00000590309 544 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC121247.2-201ENST00000604776 136 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.81□□□□□ -2.28
FOXF1Q12946 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC017083.3-201ENST00000609955 700 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC083806.3-201ENST00000614016 455 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AL158063.1-201ENST00000615349 536 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.81□□□□□ -2.28
FOXF1Q12946 BX322639.1-202ENST00000423987 2213 ntBASIC0.81□□□□□ -2.28
FOXF1Q12946 AC009541.1-201ENST00000438279 2662 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 Y_RNA.132-201ENST00000363421 102 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 RNU1-96P-201ENST00000364163 162 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 RNU6-1286P-201ENST00000383871 107 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 RNU6-1065P-201ENST00000384513 106 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 MIR194-1-201ENST00000384892 85 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
FOXF1Q12946 RNU6-1158P-201ENST00000391167 107 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.8□□□□□ -2.28
FOXF1Q12946 EIF1P1-201ENST00000421436 341 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 MTCYBP8-201ENST00000422855 651 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 USP9YP29-201ENST00000445112 563 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 OR2AQ1P-201ENST00000451972 200 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 U8.21-201ENST00000459536 136 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 HMGN2P9-201ENST00000476875 229 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 AC025465.4-201ENST00000513422 638 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 Y_RNA.695-201ENST00000516715 107 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 CENPUP1-201ENST00000526649 1202 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 SCOCP1-201ENST00000554676 349 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 HMGB1P33-201ENST00000563485 527 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 AP005136.1-201ENST00000579765 429 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 AP001330.5-201ENST00000607176 411 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 TCL6_2.1-201ENST00000615162 119 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 AL078604.3-201ENST00000615580 211 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 AC005562.2-201ENST00000618264 111 ntBASIC0.8□□□□□ -2.28
FOXF1Q12946 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.79□□□□□ -2.28
FOXF1Q12946 AC100821.1-201ENST00000523153 2479 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 OR4G1P-203ENST00000641984 1631 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
FOXF1Q12946 RNU6-862P-201ENST00000362804 105 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 RNU6-534P-201ENST00000364877 106 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 RNU6-1329P-201ENST00000365664 107 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 AL606923.1-201ENST00000406616 190 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 MIR1276-201ENST00000408707 83 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.79□□□□□ -2.28
FOXF1Q12946 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.79□□□□□ -2.28
FOXF1Q12946 AC009237.7-201ENST00000447357 229 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.79□□□□□ -2.28
FOXF1Q12946 AC114982.1-201ENST00000469402 321 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 AC011406.1-201ENST00000512440 370 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 RNU6-948P-201ENST00000516374 107 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.79□□□□□ -2.28
FOXF1Q12946 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.79□□□□□ -2.28
FOXF1Q12946 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.79□□□□□ -2.28
FOXF1Q12946 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.79□□□□□ -2.28
FOXF1Q12946 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 MIR3937-201ENST00000580135 106 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 FGF7P1-201ENST00000582820 288 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 AC073114.1-201ENST00000612027 490 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.79□□□□□ -2.28
FOXF1Q12946 SNORA29-201ENST00000384183 140 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 RNU6-975P-201ENST00000384296 105 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 SNORD116-8-201ENST00000384365 95 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 MIR586-201ENST00000385035 97 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms