Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AL732372.2-207ENST00000445840 183 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 HMGN2P18-201ENST00000450680 270 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 SEPT14P2-201ENST00000453405 183 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 RPL9P9-202ENST00000466501 579 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 MTCYBP18-201ENST00000501056 747 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AC016632.1-201ENST00000503994 196 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AC025465.4-201ENST00000513422 638 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 SEPT14P4-201ENST00000513445 186 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 SNORA19.2-201ENST00000516013 114 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 RNU6-1332P-201ENST00000516666 104 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 RNU6-612P-201ENST00000516909 102 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 FO082796.1-201ENST00000523795 183 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AL157687.1-201ENST00000554853 619 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFRSF9Q07011 MIR3923-201ENST00000579521 83 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFRSF9Q07011 CTHRC1P1-201ENST00000605383 469 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 DISC2.1-201ENST00000612827 205 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 PCGEM1.1-201ENST00000613431 131 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AL157834.3-201ENST00000615543 103 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AL121890.5-201ENST00000620848 304 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFRSF9Q07011 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFRSF9Q07011 MIR1321-201ENST00000637766 79 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AC068137.3-201ENST00000639191 341 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AC092268.1-201ENST00000342691 405 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.3-201ENST00000362331 103 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 RNU6-1252P-201ENST00000363054 104 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 RNU6-254P-201ENST00000363377 107 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 RNU6-26P-201ENST00000383985 107 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 SNORD14D-201ENST00000384390 87 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 SNORD116-4-201ENST00000384733 96 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 SNORA26.3-201ENST00000391119 136 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 RNU6-332P-201ENST00000391193 108 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 MIR1287-201ENST00000408492 90 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 SRIP3-201ENST00000413200 219 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.04□□□□□ -2.24
TNFRSF9Q07011 ARL5AP1-201ENST00000418991 388 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 MTCO1P20-201ENST00000425366 358 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.04□□□□□ -2.24
TNFRSF9Q07011 MRPS10P2-201ENST00000431226 381 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 AL359672.1-201ENST00000442302 409 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.04□□□□□ -2.24
TNFRSF9Q07011 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.04□□□□□ -2.24
TNFRSF9Q07011 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.673-201ENST00000516306 88 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 RNU6-720P-201ENST00000516363 108 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.04□□□□□ -2.24
TNFRSF9Q07011 Z98751.3-201ENST00000604447 521 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 MIR8070-201ENST00000616510 88 ntBASIC1.04□□□□□ -2.24
TNFRSF9Q07011 FER-210ENST00000628534 558 ntTSL 5 BASIC1.04□□□□□ -2.24
TNFRSF9Q07011 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
TNFRSF9Q07011 AC009541.1-201ENST00000438279 2662 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 CBX3P1-201ENST00000325243 554 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 RNU1-58P-201ENST00000362413 163 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 RNU6-227P-201ENST00000362865 103 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 RNU6-451P-201ENST00000362921 107 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 SNORD114-6-201ENST00000364393 72 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.256-201ENST00000364594 104 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 RNU4-56P-201ENST00000364700 142 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 SNORA25.9-201ENST00000365087 128 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 MIR499A-201ENST00000384903 122 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
TNFRSF9Q07011 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 AC012306.1-201ENST00000423267 114 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 RNU1-123P-201ENST00000458950 160 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 AC005741.1-201ENST00000511094 432 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.665-201ENST00000516177 98 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.03□□□□□ -2.24
TNFRSF9Q07011 MTND1P35-201ENST00000526739 508 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 AP003033.1-201ENST00000527244 415 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.03□□□□□ -2.24
TNFRSF9Q07011 MRPS36P4-201ENST00000534436 298 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 AC016957.1-201ENST00000534895 309 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 SCOCP1-201ENST00000554676 349 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.03□□□□□ -2.24
TNFRSF9Q07011 AP000654.2-201ENST00000605633 586 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.03□□□□□ -2.24
TNFRSF9Q07011 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.03□□□□□ -2.24
TNFRSF9Q07011 AC024614.3-201ENST00000637860 256 ntBASIC1.03□□□□□ -2.24
TNFRSF9Q07011 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
TNFRSF9Q07011 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
TNFRSF9Q07011 RNY3P3-201ENST00000363816 102 ntBASIC1.02□□□□□ -2.25
TNFRSF9Q07011 U3.9-201ENST00000363823 204 ntBASIC1.02□□□□□ -2.25
TNFRSF9Q07011 RNU6-214P-201ENST00000384130 107 ntBASIC1.02□□□□□ -2.25
TNFRSF9Q07011 SNORA12.2-201ENST00000391040 156 ntBASIC1.02□□□□□ -2.25
TNFRSF9Q07011 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
TNFRSF9Q07011 MTND3P21-201ENST00000433774 331 ntBASIC1.02□□□□□ -2.25
TNFRSF9Q07011 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.02□□□□□ -2.25
TNFRSF9Q07011 snoU13.6-201ENST00000458785 104 ntBASIC1.02□□□□□ -2.25
TNFRSF9Q07011 AC007547.1-201ENST00000462177 490 ntBASIC1.02□□□□□ -2.25
TNFRSF9Q07011 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.02□□□□□ -2.25
TNFRSF9Q07011 ATP5EP1-201ENST00000510257 156 ntBASIC1.02□□□□□ -2.25
TNFRSF9Q07011 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms