Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.28□□□□□ -2.2
CCNA1P78396 MTCO1P19-201ENST00000443487 500 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.28□□□□□ -2.2
CCNA1P78396 AL163195.1-201ENST00000496941 348 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 AC016632.1-201ENST00000503994 196 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.28□□□□□ -2.2
CCNA1P78396 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.28□□□□□ -2.2
CCNA1P78396 AC090115.3-201ENST00000553218 849 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.28□□□□□ -2.2
CCNA1P78396 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.28□□□□□ -2.2
CCNA1P78396 Z98751.3-201ENST00000604447 521 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 AL354950.2-201ENST00000617939 290 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 MIR6515-201ENST00000619843 57 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 SNORA43.4-201ENST00000629559 138 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 MIR3974-201ENST00000637126 96 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 AL450472.1-202ENST00000637286 180 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CCNA1P78396 MIR340-201ENST00000362125 95 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 Y_RNA.296-201ENST00000364930 108 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 RNU6-378P-201ENST00000384324 107 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 RNU6-1158P-201ENST00000391167 107 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 AL161935.2-201ENST00000414627 60 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 AC090960.1-201ENST00000421072 306 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.27□□□□□ -2.21
CCNA1P78396 AL133396.1-201ENST00000432048 687 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.27□□□□□ -2.21
CCNA1P78396 AC016925.1-201ENST00000458303 298 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 RNU7-14P-201ENST00000459331 62 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 RPS3AP17-201ENST00000472594 777 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.27□□□□□ -2.21
CCNA1P78396 AC010424.1-201ENST00000506336 297 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 RN7SKP298-201ENST00000515950 94 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 AC019176.1-201ENST00000518519 225 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.27□□□□□ -2.21
CCNA1P78396 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 AC007684.1-201ENST00000609671 477 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 HULC.1-201ENST00000612720 240 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.27□□□□□ -2.21
CCNA1P78396 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCNA1P78396 Y_RNA.1-201ENST00000352915 104 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 Y_RNA.132-201ENST00000363421 102 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 Y_RNA.354-201ENST00000365448 111 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 SNORA18.2-201ENST00000383865 132 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 Y_RNA.540-201ENST00000384638 111 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 Y_RNA.553-201ENST00000384670 102 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 SNORD37.1-201ENST00000390968 65 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 AF228730.1-201ENST00000397972 663 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 MIR548J-201ENST00000408833 112 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 RNU2-41P-201ENST00000410991 178 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.26□□□□□ -2.21
CCNA1P78396 OR2AQ1P-201ENST00000451972 200 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 AL163973.1-201ENST00000484753 577 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.26□□□□□ -2.21
CCNA1P78396 AC010486.3-201ENST00000511602 785 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 AC092436.3-201ENST00000511788 257 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 RNU6-1038P-201ENST00000516516 104 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 RNA5SP437-201ENST00000517249 129 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 MTND4P7-201ENST00000523876 130 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 EIF4A1P12-201ENST00000551910 141 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.26□□□□□ -2.21
CCNA1P78396 AC006362.1-201ENST00000567392 174 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 AC015688.6-201ENST00000577737 104 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 PCGEM1.1-201ENST00000613431 131 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 MIR8065-201ENST00000620577 100 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 AC005609.4-201ENST00000625071 447 ntBASIC1.26□□□□□ -2.21
CCNA1P78396 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCNA1P78396 RNU1-96P-201ENST00000364163 162 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 SNORA63D-201ENST00000364359 132 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 SNORA12.2-201ENST00000391040 156 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 MIR208B-201ENST00000401172 77 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 RNU4-55P-201ENST00000410731 137 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.25□□□□□ -2.21
CCNA1P78396 SNX2P2-201ENST00000424553 323 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.25□□□□□ -2.21
CCNA1P78396 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.25□□□□□ -2.21
CCNA1P78396 MTATP6P17-201ENST00000431030 672 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 AC245047.4-201ENST00000433189 144 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 AL606489.2-201ENST00000433886 234 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 MTCO2P16-201ENST00000436962 677 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 TPT1P7-201ENST00000458300 517 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 RNU7-138P-201ENST00000459479 64 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 AC026407.1-201ENST00000518369 204 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.25□□□□□ -2.21
CCNA1P78396 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.25□□□□□ -2.21
CCNA1P78396 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.25□□□□□ -2.21
CCNA1P78396 AC090517.1-201ENST00000569307 266 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 MIR3941-201ENST00000582572 103 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 AL136221.1-201ENST00000621449 509 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 AC090582.1-201ENST00000636321 199 ntBASIC1.25□□□□□ -2.21
CCNA1P78396 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CCNA1P78396 RNU6-862P-201ENST00000362804 105 ntBASIC1.24□□□□□ -2.21
CCNA1P78396 RNU6-1103P-201ENST00000384150 107 ntBASIC1.24□□□□□ -2.21
CCNA1P78396 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
CCNA1P78396 AC015922.2-201ENST00000435593 184 ntBASIC1.24□□□□□ -2.21
CCNA1P78396 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.24□□□□□ -2.21
CCNA1P78396 MTCO2P18-201ENST00000457151 658 ntBASIC1.24□□□□□ -2.21
CCNA1P78396 snoU13.6-201ENST00000458785 104 ntBASIC1.24□□□□□ -2.21
CCNA1P78396 snoU13.30-201ENST00000458951 104 ntBASIC1.24□□□□□ -2.21
CCNA1P78396 RPS23P5-201ENST00000495419 428 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms