Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
YBX1P67809 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
YBX1P67809 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.35□□□□□ -1.87
YBX1P67809 AC134026.1-201ENST00000623249 2239 ntBASIC3.35□□□□□ -1.87
YBX1P67809 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
YBX1P67809 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
YBX1P67809 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
YBX1P67809 RNA5SP205-201ENST00000364653 136 ntBASIC3.35□□□□□ -1.87
YBX1P67809 RNU6-578P-201ENST00000390980 103 ntBASIC3.35□□□□□ -1.87
YBX1P67809 SNORA26.5-201ENST00000391215 123 ntBASIC3.35□□□□□ -1.87
YBX1P67809 MIR513C-201ENST00000401352 84 ntBASIC3.35□□□□□ -1.87
YBX1P67809 RPL30P13-201ENST00000418873 348 ntBASIC3.35□□□□□ -1.87
YBX1P67809 AC008155.2-201ENST00000464337 397 ntBASIC3.35□□□□□ -1.87
YBX1P67809 RN7SL594P-201ENST00000470590 287 ntBASIC3.35□□□□□ -1.87
YBX1P67809 RNU7-121P-201ENST00000516604 62 ntBASIC3.35□□□□□ -1.87
YBX1P67809 RNU6-971P-201ENST00000516920 106 ntBASIC3.35□□□□□ -1.87
YBX1P67809 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.35□□□□□ -1.87
YBX1P67809 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.35□□□□□ -1.87
YBX1P67809 AL359881.1-201ENST00000602916 267 ntBASIC3.35□□□□□ -1.87
YBX1P67809 AC005520.5-201ENST00000613926 164 ntBASIC3.35□□□□□ -1.87
YBX1P67809 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
YBX1P67809 AC018692.3-201ENST00000623929 123 ntBASIC3.35□□□□□ -1.87
YBX1P67809 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.35□□□□□ -1.87
YBX1P67809 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.35□□□□□ -1.87
YBX1P67809 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
YBX1P67809 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
YBX1P67809 AC010733.2-201ENST00000589496 5702 ntBASIC3.35□□□□□ -1.87
YBX1P67809 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
YBX1P67809 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
YBX1P67809 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.34□□□□□ -1.87
YBX1P67809 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
YBX1P67809 AC010329.5-201ENST00000623497 2174 ntBASIC3.34□□□□□ -1.87
YBX1P67809 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.34□□□□□ -1.87
YBX1P67809 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
YBX1P67809 RNU6-103P-201ENST00000363686 107 ntBASIC3.34□□□□□ -1.87
YBX1P67809 RNU4-10P-201ENST00000364383 140 ntBASIC3.34□□□□□ -1.87
YBX1P67809 Y_RNA.287-201ENST00000364853 94 ntBASIC3.34□□□□□ -1.87
YBX1P67809 SNORA20-201ENST00000384662 132 ntBASIC3.34□□□□□ -1.87
YBX1P67809 RNVU1-14-201ENST00000384770 164 ntBASIC3.34□□□□□ -1.87
YBX1P67809 AL133475.1-201ENST00000404414 305 ntBASIC3.34□□□□□ -1.87
YBX1P67809 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.34□□□□□ -1.87
YBX1P67809 AL137159.1-201ENST00000452808 512 ntBASIC3.34□□□□□ -1.87
YBX1P67809 RPL31P41-201ENST00000477967 372 ntBASIC3.34□□□□□ -1.87
YBX1P67809 AC021205.2-201ENST00000480069 347 ntBASIC3.34□□□□□ -1.87
YBX1P67809 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.34□□□□□ -1.87
YBX1P67809 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.34□□□□□ -1.87
YBX1P67809 AC107027.2-201ENST00000512197 115 ntBASIC3.34□□□□□ -1.87
YBX1P67809 IGKV2-26-201ENST00000518305 343 ntBASIC3.34□□□□□ -1.87
YBX1P67809 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.34□□□□□ -1.87
YBX1P67809 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.34□□□□□ -1.87
YBX1P67809 AL078604.3-201ENST00000615580 211 ntBASIC3.34□□□□□ -1.87
YBX1P67809 AC013791.1-201ENST00000616619 62 ntBASIC3.34□□□□□ -1.87
YBX1P67809 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
YBX1P67809 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.34□□□□□ -1.88
YBX1P67809 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
YBX1P67809 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.34□□□□□ -1.88
YBX1P67809 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
YBX1P67809 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
YBX1P67809 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
YBX1P67809 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
YBX1P67809 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
YBX1P67809 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
YBX1P67809 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.33□□□□□ -1.88
YBX1P67809 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.33□□□□□ -1.88
YBX1P67809 AC091152.2-201ENST00000591628 2569 ntBASIC3.33□□□□□ -1.88
YBX1P67809 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.33□□□□□ -1.88
YBX1P67809 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
YBX1P67809 SNORD87-201ENST00000364849 89 ntBASIC3.33□□□□□ -1.88
YBX1P67809 Y_RNA.353-201ENST00000365440 108 ntBASIC3.33□□□□□ -1.88
YBX1P67809 SNORA8.3-201ENST00000384679 139 ntBASIC3.33□□□□□ -1.88
YBX1P67809 MTND4LP9-201ENST00000427694 174 ntBASIC3.33□□□□□ -1.88
YBX1P67809 AC027124.2-201ENST00000428249 105 ntBASIC3.33□□□□□ -1.88
YBX1P67809 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.33□□□□□ -1.88
YBX1P67809 AC107626.1-201ENST00000471084 183 ntBASIC3.33□□□□□ -1.88
YBX1P67809 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
YBX1P67809 AC006445.2-201ENST00000510061 472 ntBASIC3.33□□□□□ -1.88
YBX1P67809 RPL23AP94-201ENST00000512518 302 ntBASIC3.33□□□□□ -1.88
YBX1P67809 RNU6-1333P-201ENST00000516162 93 ntBASIC3.33□□□□□ -1.88
YBX1P67809 HMGN2P15-201ENST00000585707 270 ntBASIC3.33□□□□□ -1.88
YBX1P67809 DNAJC19P2-201ENST00000593340 302 ntBASIC3.33□□□□□ -1.88
YBX1P67809 AL034555.1-201ENST00000604816 211 ntBASIC3.33□□□□□ -1.88
YBX1P67809 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
YBX1P67809 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
YBX1P67809 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.33□□□□□ -1.88
YBX1P67809 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.33□□□□□ -1.88
YBX1P67809 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
YBX1P67809 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
YBX1P67809 AL021368.2-201ENST00000606125 5352 ntBASIC3.32□□□□□ -1.88
YBX1P67809 RNU6-199P-201ENST00000362954 107 ntBASIC3.32□□□□□ -1.88
YBX1P67809 RNU6-1048P-201ENST00000364054 107 ntBASIC3.32□□□□□ -1.88
YBX1P67809 snoU2_19.4-201ENST00000364329 80 ntBASIC3.32□□□□□ -1.88
YBX1P67809 Y_RNA.273-201ENST00000364703 102 ntBASIC3.32□□□□□ -1.88
YBX1P67809 MIR626-201ENST00000385032 94 ntBASIC3.32□□□□□ -1.88
YBX1P67809 MIR591-201ENST00000385290 95 ntBASIC3.32□□□□□ -1.88
YBX1P67809 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.32□□□□□ -1.88
YBX1P67809 AL031003.1-201ENST00000404229 172 ntBASIC3.32□□□□□ -1.88
YBX1P67809 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.32□□□□□ -1.88
YBX1P67809 AC017083.1-201ENST00000428093 483 ntBASIC3.32□□□□□ -1.88
YBX1P67809 AL135790.2-201ENST00000437701 267 ntBASIC3.32□□□□□ -1.88
YBX1P67809 CYCSP35-201ENST00000451978 304 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms