Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR4709-201ENST00000577272 72 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 U2.17-201ENST00000611454 95 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 AC040896.1-201ENST00000613819 479 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.01□□□□□ -2.25
CLDN6P56747 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 BX322639.1-202ENST00000423987 2213 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CLDN6P56747 RNU6-562P-201ENST00000362731 107 ntBASIC1□□□□□ -2.25
CLDN6P56747 RNU6-1106P-201ENST00000390845 107 ntBASIC1□□□□□ -2.25
CLDN6P56747 RNU2-9P-201ENST00000410194 145 ntBASIC1□□□□□ -2.25
CLDN6P56747 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1□□□□□ -2.25
CLDN6P56747 MTCO2P34-201ENST00000421994 607 ntBASIC1□□□□□ -2.25
CLDN6P56747 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1□□□□□ -2.25
CLDN6P56747 USP9YP14-201ENST00000430663 563 ntBASIC1□□□□□ -2.25
CLDN6P56747 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1□□□□□ -2.25
CLDN6P56747 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1□□□□□ -2.25
CLDN6P56747 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1□□□□□ -2.25
CLDN6P56747 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1□□□□□ -2.25
CLDN6P56747 AC105417.1-201ENST00000514691 285 ntBASIC1□□□□□ -2.25
CLDN6P56747 RNU2-34P-201ENST00000516534 121 ntBASIC1□□□□□ -2.25
CLDN6P56747 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
CLDN6P56747 MIR3908-201ENST00000579798 126 ntBASIC1□□□□□ -2.25
CLDN6P56747 MZT1P2-201ENST00000604387 248 ntBASIC1□□□□□ -2.25
CLDN6P56747 AL136370.1-201ENST00000608166 691 ntBASIC1□□□□□ -2.25
CLDN6P56747 AC009161.2-201ENST00000624626 138 ntBASIC1□□□□□ -2.25
CLDN6P56747 AC007494.3-201ENST00000624660 743 ntBASIC1□□□□□ -2.25
CLDN6P56747 MIR338-201ENST00000636369 67 ntBASIC1□□□□□ -2.25
CLDN6P56747 AC099654.5-201ENST00000636479 350 ntBASIC1□□□□□ -2.25
CLDN6P56747 Y_RNA.30-201ENST00000362572 97 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 RNU6-181P-201ENST00000363225 107 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.99□□□□□ -2.25
CLDN6P56747 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.99□□□□□ -2.25
CLDN6P56747 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.99□□□□□ -2.25
CLDN6P56747 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.99□□□□□ -2.25
CLDN6P56747 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 RN7SKP88-201ENST00000516847 250 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 RNU6-445P-201ENST00000516949 107 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 DEFB108E-201ENST00000524692 240 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 AL137161.1-201ENST00000532231 390 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 AC011712.1-201ENST00000588959 234 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 7SK.8-201ENST00000612110 250 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 7SK.11-201ENST00000615477 250 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 7SK.13-201ENST00000622040 250 ntBASIC0.99□□□□□ -2.25
CLDN6P56747 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CLDN6P56747 FGF7P2-201ENST00000332473 296 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 RNU4-21P-201ENST00000362802 126 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 SNORA72.2-201ENST00000365028 127 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 RNA5SP259-201ENST00000365541 109 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.98□□□□□ -2.25
CLDN6P56747 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.98□□□□□ -2.25
CLDN6P56747 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.98□□□□□ -2.25
CLDN6P56747 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.98□□□□□ -2.25
CLDN6P56747 RPL39P5-202ENST00000512505 151 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 RNU6-405P-201ENST00000516637 110 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.98□□□□□ -2.25
CLDN6P56747 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.98□□□□□ -2.25
CLDN6P56747 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 MIR3915-201ENST00000578518 97 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 MIR5583-1-201ENST00000580941 59 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 RN7SL793P-201ENST00000583259 296 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 AC087683.2-201ENST00000611384 326 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 AC005562.2-201ENST00000618264 111 ntBASIC0.98□□□□□ -2.25
CLDN6P56747 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.98□□□□□ -2.25
CLDN6P56747 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CLDN6P56747 snoU2-30.2-201ENST00000362805 70 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 Y_RNA.201-201ENST00000364052 96 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 RNY3P10-201ENST00000384764 102 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 MIR216A-201ENST00000385063 110 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 SNORD73A-201ENST00000386062 65 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CLDN6P56747 RNU6-248P-201ENST00000410720 107 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 PIGFP2-201ENST00000421400 651 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.97□□□□□ -2.25
CLDN6P56747 CETN4P-201ENST00000432407 469 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 MTCO2P3-201ENST00000442543 421 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 PGBD4P5-201ENST00000445958 426 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 AC016717.1-201ENST00000448918 286 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 AL442163.3-201ENST00000554110 156 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 SUB1P2-201ENST00000556401 297 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 AC005730.3-201ENST00000583067 366 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 AC008536.2-201ENST00000607284 349 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 AP001596.2-201ENST00000608410 312 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 AL359697.1-201ENST00000624879 587 ntBASIC0.97□□□□□ -2.25
CLDN6P56747 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.97□□□□□ -2.25
CLDN6P56747 AC018630.2-201ENST00000534866 2403 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 SNORA33-201ENST00000363664 130 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 RNU1-133P-201ENST00000364867 167 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 RNU6-534P-201ENST00000364877 106 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 SNORA72.3-201ENST00000365074 132 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 RNU6-1235P-201ENST00000384559 107 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 MT-TH-201ENST00000387441 69 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CLDN6P56747 RNU6-903P-201ENST00000391270 109 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.96□□□□□ -2.26
CLDN6P56747 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.96□□□□□ -2.26
CLDN6P56747 AC004386.2-201ENST00000441858 148 ntBASIC0.96□□□□□ -2.26
CLDN6P56747 RPS29P28-201ENST00000446439 141 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms