Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6-718P-201ENST00000516166 105 ntBASIC1.81□□□□□ -2.12
VCPP55072 RNU6-567P-201ENST00000516746 107 ntBASIC1.81□□□□□ -2.12
VCPP55072 CBX3P4-201ENST00000538909 354 ntBASIC1.81□□□□□ -2.12
VCPP55072 CPDP1-201ENST00000579660 283 ntBASIC1.81□□□□□ -2.12
VCPP55072 MIR4713-201ENST00000582691 75 ntBASIC1.81□□□□□ -2.12
VCPP55072 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.81□□□□□ -2.12
VCPP55072 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.81□□□□□ -2.12
VCPP55072 PCGEM1.1-201ENST00000613431 131 ntBASIC1.81□□□□□ -2.12
VCPP55072 RNA5SP118-201ENST00000410385 109 ntBASIC1.8□□□□□ -2.12
VCPP55072 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.8□□□□□ -2.12
VCPP55072 USP9YP28-201ENST00000435142 589 ntBASIC1.8□□□□□ -2.12
VCPP55072 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.8□□□□□ -2.12
VCPP55072 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.8□□□□□ -2.12
VCPP55072 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.8□□□□□ -2.12
VCPP55072 RPS29P25-201ENST00000481709 171 ntBASIC1.8□□□□□ -2.12
VCPP55072 AC096745.1-201ENST00000509945 370 ntBASIC1.8□□□□□ -2.12
VCPP55072 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.8□□□□□ -2.12
VCPP55072 PTP4A1P4-201ENST00000512479 322 ntBASIC1.8□□□□□ -2.12
VCPP55072 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.8□□□□□ -2.12
VCPP55072 AC109446.1-201ENST00000566172 220 ntBASIC1.8□□□□□ -2.12
VCPP55072 CYP4A27P-201ENST00000567218 190 ntBASIC1.8□□□□□ -2.12
VCPP55072 MIR4255-201ENST00000579351 72 ntBASIC1.8□□□□□ -2.12
VCPP55072 AL645939.4-201ENST00000604495 135 ntBASIC1.8□□□□□ -2.12
VCPP55072 AP000654.2-201ENST00000605633 586 ntBASIC1.8□□□□□ -2.12
VCPP55072 AC098679.4-201ENST00000624241 654 ntBASIC1.8□□□□□ -2.12
VCPP55072 AC090617.10-201ENST00000624308 134 ntBASIC1.8□□□□□ -2.12
VCPP55072 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.8□□□□□ -2.12
VCPP55072 MIR3662-201ENST00000637030 95 ntBASIC1.8□□□□□ -2.12
VCPP55072 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VCPP55072 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VCPP55072 U3.9-201ENST00000363823 204 ntBASIC1.79□□□□□ -2.12
VCPP55072 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
VCPP55072 RNU6-26P-201ENST00000383985 107 ntBASIC1.79□□□□□ -2.12
VCPP55072 Y_RNA.414-201ENST00000384011 101 ntBASIC1.79□□□□□ -2.12
VCPP55072 RNU6-378P-201ENST00000384324 107 ntBASIC1.79□□□□□ -2.12
VCPP55072 SNORD14D-201ENST00000384390 87 ntBASIC1.79□□□□□ -2.12
VCPP55072 MIR597-201ENST00000384968 97 ntBASIC1.79□□□□□ -2.12
VCPP55072 RNU6-192P-201ENST00000391253 100 ntBASIC1.79□□□□□ -2.12
VCPP55072 SRIP3-201ENST00000413200 219 ntBASIC1.79□□□□□ -2.12
VCPP55072 AC012306.1-201ENST00000423267 114 ntBASIC1.79□□□□□ -2.12
VCPP55072 MTCO3P18-201ENST00000440206 761 ntBASIC1.79□□□□□ -2.12
VCPP55072 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.79□□□□□ -2.12
VCPP55072 AC021146.2-201ENST00000504736 556 ntBASIC1.79□□□□□ -2.12
VCPP55072 RNU6-256P-201ENST00000516747 97 ntBASIC1.79□□□□□ -2.12
VCPP55072 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.79□□□□□ -2.12
VCPP55072 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.79□□□□□ -2.12
VCPP55072 AC022254.1-201ENST00000567857 235 ntBASIC1.79□□□□□ -2.12
VCPP55072 AC104581.2-201ENST00000572227 430 ntBASIC1.79□□□□□ -2.12
VCPP55072 MIR3672-201ENST00000584290 82 ntBASIC1.79□□□□□ -2.12
VCPP55072 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VCPP55072 AL138726.1-201ENST00000614873 333 ntBASIC1.79□□□□□ -2.12
VCPP55072 AC100810.6-201ENST00000638068 285 ntBASIC1.79□□□□□ -2.12
VCPP55072 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
VCPP55072 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.79□□□□□ -2.12
VCPP55072 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.78□□□□□ -2.12
VCPP55072 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
VCPP55072 Y_RNA.123-201ENST00000363338 102 ntBASIC1.78□□□□□ -2.12
VCPP55072 RNU4-42P-201ENST00000364738 142 ntBASIC1.78□□□□□ -2.12
VCPP55072 RNU6-933P-201ENST00000384424 107 ntBASIC1.78□□□□□ -2.12
VCPP55072 MIR521-1-201ENST00000384902 87 ntBASIC1.78□□□□□ -2.12
VCPP55072 FCF1P9-201ENST00000412546 282 ntBASIC1.78□□□□□ -2.12
VCPP55072 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.78□□□□□ -2.12
VCPP55072 AC009161.1-201ENST00000417306 376 ntBASIC1.78□□□□□ -2.12
VCPP55072 EIF4EP2-201ENST00000422816 654 ntBASIC1.78□□□□□ -2.12
VCPP55072 AL513185.2-201ENST00000425543 193 ntBASIC1.78□□□□□ -2.12
VCPP55072 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VCPP55072 RNU7-187P-201ENST00000458985 68 ntBASIC1.78□□□□□ -2.12
VCPP55072 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.78□□□□□ -2.12
VCPP55072 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.78□□□□□ -2.12
VCPP55072 AC093259.1-201ENST00000509755 300 ntBASIC1.78□□□□□ -2.12
VCPP55072 RNU6-1314P-201ENST00000517139 104 ntBASIC1.78□□□□□ -2.12
VCPP55072 AC016256.1-201ENST00000547971 354 ntBASIC1.78□□□□□ -2.12
VCPP55072 EIF4A1P12-201ENST00000551910 141 ntBASIC1.78□□□□□ -2.12
VCPP55072 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.78□□□□□ -2.12
VCPP55072 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.78□□□□□ -2.12
VCPP55072 AC080078.2-201ENST00000603766 501 ntBASIC1.78□□□□□ -2.12
VCPP55072 MIR8076-201ENST00000611401 83 ntBASIC1.78□□□□□ -2.12
VCPP55072 AC005520.5-201ENST00000613926 164 ntBASIC1.78□□□□□ -2.12
VCPP55072 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.78□□□□□ -2.12
VCPP55072 AL136221.1-201ENST00000621449 509 ntBASIC1.78□□□□□ -2.12
VCPP55072 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
VCPP55072 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.13
VCPP55072 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.77□□□□□ -2.13
VCPP55072 Y_RNA.157-201ENST00000363638 102 ntBASIC1.77□□□□□ -2.13
VCPP55072 SNORA29-201ENST00000384183 140 ntBASIC1.77□□□□□ -2.13
VCPP55072 RNU6-95P-201ENST00000384697 107 ntBASIC1.77□□□□□ -2.13
VCPP55072 MIR208B-201ENST00000401172 77 ntBASIC1.77□□□□□ -2.13
VCPP55072 MIR1277-201ENST00000408536 78 ntBASIC1.77□□□□□ -2.13
VCPP55072 EIF1P1-201ENST00000421436 341 ntBASIC1.77□□□□□ -2.13
VCPP55072 AL590632.1-201ENST00000424289 371 ntBASIC1.77□□□□□ -2.13
VCPP55072 MTND1P4-201ENST00000435196 415 ntBASIC1.77□□□□□ -2.13
VCPP55072 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.77□□□□□ -2.13
VCPP55072 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.77□□□□□ -2.13
VCPP55072 MTND1P11-201ENST00000456661 876 ntBASIC1.77□□□□□ -2.13
VCPP55072 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.77□□□□□ -2.13
VCPP55072 AC146944.4-201ENST00000602697 718 ntBASIC1.77□□□□□ -2.13
VCPP55072 AP000907.4-201ENST00000604143 237 ntBASIC1.77□□□□□ -2.13
VCPP55072 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
VCPP55072 AL133215.3-201ENST00000609801 448 ntBASIC1.77□□□□□ -2.13
VCPP55072 AC022709.1-201ENST00000615967 87 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms