Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU6-18P-201ENST00000384527 107 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 Y_RNA.577-201ENST00000384794 101 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 MIR190B-201ENST00000401119 79 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 RNU6-1156P-201ENST00000410365 100 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 AC007098.1-201ENST00000420122 367 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NR1H2P55055 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 RPS23P5-201ENST00000495419 428 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 AC105758.1-201ENST00000506038 399 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 AC093259.1-201ENST00000509755 300 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.41□□□□□ -2.02
NR1H2P55055 RNU5F-4P-201ENST00000516581 114 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 Y_RNA.701-201ENST00000516812 110 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 RNA5SP490-201ENST00000517141 136 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.41□□□□□ -2.02
NR1H2P55055 AC233702.2-202ENST00000562547 291 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 AC090517.1-201ENST00000569307 266 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 MIR4635-201ENST00000583759 79 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 MIR1248-201ENST00000629190 106 ntBASIC2.41□□□□□ -2.02
NR1H2P55055 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
NR1H2P55055 RNU6-1115P-201ENST00000362490 106 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 RNU6-743P-201ENST00000364151 106 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 RNU1-112P-201ENST00000364401 164 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 MIR549A-201ENST00000385268 96 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 MRPS18CP6-201ENST00000423587 223 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 MTCO2P12-201ENST00000427426 682 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.4□□□□□ -2.03
NR1H2P55055 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 Y_RNA.661-201ENST00000516003 99 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 RNU6-1153P-201ENST00000516760 105 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 RNA5SP54-201ENST00000516951 92 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 SNORA31.25-201ENST00000517242 134 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
NR1H2P55055 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.4□□□□□ -2.03
NR1H2P55055 SNRPGP20-201ENST00000604477 205 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.4□□□□□ -2.03
NR1H2P55055 AC012640.5-201ENST00000623897 319 ntBASIC2.4□□□□□ -2.03
NR1H2P55055 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.4□□□□□ -2.03
NR1H2P55055 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NR1H2P55055 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.39□□□□□ -2.03
NR1H2P55055 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NR1H2P55055 Y_RNA.5-201ENST00000362334 102 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 RNU6-874P-201ENST00000362390 105 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 Y_RNA.106-201ENST00000363189 100 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 Y_RNA.138-201ENST00000363462 102 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 Y_RNA.319-201ENST00000365138 92 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 RNU6-438P-201ENST00000365561 103 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 RNU6-541P-201ENST00000384709 110 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 MTND1P14-201ENST00000427400 950 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 Y_RNA.639-201ENST00000458981 102 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 RNU7-87P-201ENST00000459343 62 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.39□□□□□ -2.03
NR1H2P55055 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.39□□□□□ -2.03
NR1H2P55055 RNU6-976P-201ENST00000516086 111 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.39□□□□□ -2.03
NR1H2P55055 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NR1H2P55055 MYL12BP1-201ENST00000569826 507 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.39□□□□□ -2.03
NR1H2P55055 AC044792.1-201ENST00000593294 196 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 AC016727.2-201ENST00000603988 621 ntBASIC2.39□□□□□ -2.03
NR1H2P55055 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.39□□□□□ -2.03
NR1H2P55055 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NR1H2P55055 RNU1-76P-201ENST00000362903 159 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 RNU6-137P-201ENST00000363680 108 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 RNU5F-3P-201ENST00000363767 117 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 RNU4-76P-201ENST00000364509 141 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 Y_RNA.314-201ENST00000365114 102 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 Y_RNA.395-201ENST00000383945 109 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 Y_RNA.428-201ENST00000384078 102 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 RNU6-1026P-201ENST00000384465 108 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 MIR625-201ENST00000385047 85 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.38□□□□□ -2.03
NR1H2P55055 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.38□□□□□ -2.03
NR1H2P55055 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.38□□□□□ -2.03
NR1H2P55055 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.38□□□□□ -2.03
NR1H2P55055 AC099799.1-201ENST00000439809 192 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 AC007677.1-201ENST00000445757 515 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 HMGN2P18-201ENST00000450680 270 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 AC007215.1-201ENST00000464893 276 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 SNORD116.3-201ENST00000517176 78 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 AP002770.2-201ENST00000543613 532 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 AC027288.2-201ENST00000553028 243 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.38□□□□□ -2.03
NR1H2P55055 AC007229.1-201ENST00000590455 412 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.38□□□□□ -2.03
NR1H2P55055 uc_338.22-201ENST00000622722 187 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 AC243829.7-201ENST00000633081 225 ntBASIC2.38□□□□□ -2.03
NR1H2P55055 AC008555.8-201ENST00000623602 2168 ntBASIC2.37□□□□□ -2.03
NR1H2P55055 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NR1H2P55055 MTND5P16-201ENST00000460269 1703 ntBASIC2.37□□□□□ -2.03
NR1H2P55055 RNU6-222P-201ENST00000362438 107 ntBASIC2.37□□□□□ -2.03
NR1H2P55055 XGY1-201ENST00000381172 446 ntBASIC2.37□□□□□ -2.03
NR1H2P55055 SNORA6-201ENST00000384033 151 ntBASIC2.37□□□□□ -2.03
NR1H2P55055 Y_RNA.445-201ENST00000384168 102 ntBASIC2.37□□□□□ -2.03
NR1H2P55055 RNU6-474P-201ENST00000384243 107 ntBASIC2.37□□□□□ -2.03
NR1H2P55055 MIR518A2-201ENST00000384966 87 ntBASIC2.37□□□□□ -2.03
NR1H2P55055 AL354751.2-201ENST00000415471 210 ntBASIC2.37□□□□□ -2.03
NR1H2P55055 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms