Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CUL1P1-201ENST00000509510 2425 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 FAM35BP-202ENST00000497389 3337 ntBASIC3.36□□□□□ -1.87
EPHB4P54760 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EPHB4P54760 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.36□□□□□ -1.87
EPHB4P54760 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.36□□□□□ -1.87
EPHB4P54760 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EPHB4P54760 RNU5B-2P-201ENST00000363036 113 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 Y_RNA.308-201ENST00000365043 101 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 Y_RNA.398-201ENST00000383952 99 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 MIR329-1-201ENST00000385028 80 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 SNORA46.1-201ENST00000391069 153 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 RNU6-159P-201ENST00000391080 106 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
EPHB4P54760 AL451074.5-201ENST00000415894 435 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.35□□□□□ -1.87
EPHB4P54760 AC010095.1-201ENST00000443543 144 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.35□□□□□ -1.87
EPHB4P54760 RNU6-1219P-201ENST00000516143 112 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 RN7SKP43-201ENST00000516173 320 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 SNORA27.4-201ENST00000516650 95 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 RNU6-58P-201ENST00000517143 103 ntBASIC3.35□□□□□ -1.87
EPHB4P54760 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
EPHB4P54760 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
EPHB4P54760 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
EPHB4P54760 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.34□□□□□ -1.87
EPHB4P54760 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
EPHB4P54760 UBE2WP1-201ENST00000362030 340 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 MIR493-201ENST00000385254 89 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 RN7SKP123-201ENST00000410732 291 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.34□□□□□ -1.87
EPHB4P54760 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.34□□□□□ -1.87
EPHB4P54760 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.34□□□□□ -1.87
EPHB4P54760 AC092047.1-201ENST00000424997 240 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 AL512844.2-201ENST00000433990 593 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.34□□□□□ -1.87
EPHB4P54760 RPS12P18-201ENST00000442381 270 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 GPM6BP3-201ENST00000442797 145 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.34□□□□□ -1.87
EPHB4P54760 AC009237.7-201ENST00000447357 229 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 AC007395.1-201ENST00000451333 677 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.34□□□□□ -1.87
EPHB4P54760 SNORA40.9-201ENST00000515895 93 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 AC079600.2-201ENST00000550076 130 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 HSPE1P4-201ENST00000550617 308 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.34□□□□□ -1.87
EPHB4P54760 AP001485.1-201ENST00000604799 199 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 AC005828.6-201ENST00000606610 232 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 AL365265.1-201ENST00000621045 234 ntBASIC3.34□□□□□ -1.87
EPHB4P54760 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
EPHB4P54760 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.34□□□□□ -1.88
EPHB4P54760 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
EPHB4P54760 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
EPHB4P54760 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.33□□□□□ -1.88
EPHB4P54760 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
EPHB4P54760 Y_RNA.230-201ENST00000364348 109 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 SNORA36A-201ENST00000384221 132 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 RNU6-1081P-201ENST00000384537 107 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 RNU6-1197P-201ENST00000391183 107 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 RNA5SP508-201ENST00000411327 119 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 AL390729.2-201ENST00000416137 156 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 AC024067.1-201ENST00000426199 223 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 RPL23AP95-201ENST00000426806 265 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 EEF1B2P7-201ENST00000451177 676 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 MTATP6P7-201ENST00000453315 681 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 snoU13.6-201ENST00000458785 104 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.33□□□□□ -1.88
EPHB4P54760 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EPHB4P54760 AC005176.2-201ENST00000596933 147 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 AC019159.1-201ENST00000605094 187 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 AL138963.2-201ENST00000605137 226 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 FTX_3.1-201ENST00000610451 147 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 AC073349.3-201ENST00000617616 186 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.33□□□□□ -1.88
EPHB4P54760 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.32□□□□□ -1.88
EPHB4P54760 MAPK10-322ENST00000641485 4530 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EPHB4P54760 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EPHB4P54760 Y_RNA.136-201ENST00000363444 102 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 RNU6-1145P-201ENST00000384246 107 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 SNORA1.3-201ENST00000384676 136 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 MIR544A-201ENST00000384855 91 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 Y_RNA.597-201ENST00000410463 100 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 RNU6-394P-201ENST00000410735 107 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 AC138623.1-201ENST00000418060 216 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 HMGN2P30-201ENST00000423237 256 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 UQCRBP2-201ENST00000447827 297 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 SNORA31.1-201ENST00000515993 133 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 SNORA31.5-201ENST00000516190 133 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 SNORD59.2-201ENST00000516873 68 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.32□□□□□ -1.88
EPHB4P54760 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.32□□□□□ -1.88
EPHB4P54760 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.32□□□□□ -1.88
EPHB4P54760 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.32□□□□□ -1.88
EPHB4P54760 MIR4308-201ENST00000580634 81 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 AC006111.3-201ENST00000622137 383 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.32□□□□□ -1.88
EPHB4P54760 U2.21-201ENST00000637295 81 ntBASIC3.32□□□□□ -1.88
EPHB4P54760 AC110774.1-201ENST00000623567 2018 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms