Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AL161935.2-201ENST00000414627 60 ntBASIC1.22□□□□□ -2.21
ACLYP53396 AC090960.1-201ENST00000421072 306 ntBASIC1.22□□□□□ -2.21
ACLYP53396 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.22□□□□□ -2.21
ACLYP53396 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.22□□□□□ -2.21
ACLYP53396 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.22□□□□□ -2.21
ACLYP53396 AL031667.1-201ENST00000440222 725 ntBASIC1.22□□□□□ -2.21
ACLYP53396 OR2AQ1P-201ENST00000451972 200 ntBASIC1.22□□□□□ -2.21
ACLYP53396 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.22□□□□□ -2.21
ACLYP53396 RNU7-63P-201ENST00000459054 62 ntBASIC1.22□□□□□ -2.21
ACLYP53396 AC091435.1-201ENST00000505442 584 ntBASIC1.22□□□□□ -2.21
ACLYP53396 AC067942.3-201ENST00000512025 362 ntBASIC1.22□□□□□ -2.21
ACLYP53396 RPL39P5-202ENST00000512505 151 ntBASIC1.22□□□□□ -2.21
ACLYP53396 RNU2-34P-201ENST00000516534 121 ntBASIC1.22□□□□□ -2.21
ACLYP53396 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
ACLYP53396 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.22□□□□□ -2.21
ACLYP53396 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.22□□□□□ -2.21
ACLYP53396 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.22□□□□□ -2.21
ACLYP53396 AC016256.1-201ENST00000547971 354 ntBASIC1.22□□□□□ -2.21
ACLYP53396 AC091812.1-201ENST00000432235 1948 ntBASIC1.22□□□□□ -2.21
ACLYP53396 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ACLYP53396 Y_RNA.169-201ENST00000363745 96 ntBASIC1.21□□□□□ -2.22
ACLYP53396 MRPL35P1-201ENST00000404272 572 ntBASIC1.21□□□□□ -2.22
ACLYP53396 MTCYBP8-201ENST00000422855 651 ntBASIC1.21□□□□□ -2.22
ACLYP53396 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.21□□□□□ -2.22
ACLYP53396 snoU13.6-201ENST00000458785 104 ntBASIC1.21□□□□□ -2.22
ACLYP53396 MTND3P7-201ENST00000474435 343 ntBASIC1.21□□□□□ -2.22
ACLYP53396 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
ACLYP53396 MTCO2P4-201ENST00000517968 247 ntBASIC1.21□□□□□ -2.22
ACLYP53396 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
ACLYP53396 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.21□□□□□ -2.22
ACLYP53396 AC015688.6-201ENST00000577737 104 ntBASIC1.21□□□□□ -2.22
ACLYP53396 MIR3937-201ENST00000580135 106 ntBASIC1.21□□□□□ -2.22
ACLYP53396 AL078604.3-201ENST00000615580 211 ntBASIC1.21□□□□□ -2.22
ACLYP53396 uc_338.34-201ENST00000617467 174 ntBASIC1.21□□□□□ -2.22
ACLYP53396 AC008147.4-201ENST00000617570 1204 ntBASIC1.21□□□□□ -2.22
ACLYP53396 AC023510.2-201ENST00000622162 746 ntBASIC1.21□□□□□ -2.22
ACLYP53396 AC005609.4-201ENST00000625071 447 ntBASIC1.21□□□□□ -2.22
ACLYP53396 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
ACLYP53396 MIR373-201ENST00000362273 69 ntBASIC1.2□□□□□ -2.22
ACLYP53396 Y_RNA.36-201ENST00000362602 112 ntBASIC1.2□□□□□ -2.22
ACLYP53396 RNU6-418P-201ENST00000384035 107 ntBASIC1.2□□□□□ -2.22
ACLYP53396 MIR1283-1-201ENST00000408494 87 ntBASIC1.2□□□□□ -2.22
ACLYP53396 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.2□□□□□ -2.22
ACLYP53396 AC060773.1-201ENST00000421698 310 ntBASIC1.2□□□□□ -2.22
ACLYP53396 MTND2P9-201ENST00000422293 931 ntBASIC1.2□□□□□ -2.22
ACLYP53396 CST2P1-201ENST00000425770 87 ntBASIC1.2□□□□□ -2.22
ACLYP53396 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.2□□□□□ -2.22
ACLYP53396 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.2□□□□□ -2.22
ACLYP53396 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.2□□□□□ -2.22
ACLYP53396 AC011406.1-201ENST00000512440 370 ntBASIC1.2□□□□□ -2.22
ACLYP53396 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ACLYP53396 RNA5SP436-201ENST00000516020 115 ntBASIC1.2□□□□□ -2.22
ACLYP53396 RNU6-612P-201ENST00000516909 102 ntBASIC1.2□□□□□ -2.22
ACLYP53396 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.2□□□□□ -2.22
ACLYP53396 AP003465.2-201ENST00000602571 373 ntBASIC1.2□□□□□ -2.22
ACLYP53396 AC126177.8-201ENST00000618339 1015 ntBASIC1.2□□□□□ -2.22
ACLYP53396 RNA5SP325-201ENST00000363756 130 ntBASIC1.19□□□□□ -2.22
ACLYP53396 RNU6-996P-201ENST00000365438 107 ntBASIC1.19□□□□□ -2.22
ACLYP53396 RNA5SP219-201ENST00000390940 113 ntBASIC1.19□□□□□ -2.22
ACLYP53396 AC073415.1-201ENST00000449240 153 ntBASIC1.19□□□□□ -2.22
ACLYP53396 snoU13.27-201ENST00000459278 104 ntBASIC1.19□□□□□ -2.22
ACLYP53396 RPL30P7-201ENST00000479312 323 ntBASIC1.19□□□□□ -2.22
ACLYP53396 CCDC34P1-201ENST00000507441 517 ntBASIC1.19□□□□□ -2.22
ACLYP53396 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.19□□□□□ -2.22
ACLYP53396 RNA5SP384-201ENST00000516615 116 ntBASIC1.19□□□□□ -2.22
ACLYP53396 MTND4P7-201ENST00000523876 130 ntBASIC1.19□□□□□ -2.22
ACLYP53396 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.19□□□□□ -2.22
ACLYP53396 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.19□□□□□ -2.22
ACLYP53396 MIR4753-201ENST00000585119 83 ntBASIC1.19□□□□□ -2.22
ACLYP53396 HULC.1-201ENST00000612720 240 ntBASIC1.19□□□□□ -2.22
ACLYP53396 AC005562.2-201ENST00000618264 111 ntBASIC1.19□□□□□ -2.22
ACLYP53396 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.19□□□□□ -2.22
ACLYP53396 AL359697.1-201ENST00000624879 587 ntBASIC1.19□□□□□ -2.22
ACLYP53396 BX322639.1-202ENST00000423987 2213 ntBASIC1.19□□□□□ -2.22
ACLYP53396 RNU6-227P-201ENST00000362865 103 ntBASIC1.18□□□□□ -2.22
ACLYP53396 RNU6-331P-201ENST00000384724 107 ntBASIC1.18□□□□□ -2.22
ACLYP53396 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.18□□□□□ -2.22
ACLYP53396 RN7SKP142-201ENST00000411236 328 ntBASIC1.18□□□□□ -2.22
ACLYP53396 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
ACLYP53396 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.18□□□□□ -2.22
ACLYP53396 RNU6-1037P-201ENST00000459571 107 ntBASIC1.18□□□□□ -2.22
ACLYP53396 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.18□□□□□ -2.22
ACLYP53396 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.18□□□□□ -2.22
ACLYP53396 LRRC34P1-201ENST00000542742 915 ntBASIC1.18□□□□□ -2.22
ACLYP53396 AC026470.2-201ENST00000561492 181 ntBASIC1.18□□□□□ -2.22
ACLYP53396 AC004223.2-201ENST00000590309 544 ntBASIC1.18□□□□□ -2.22
ACLYP53396 NIFKP6-201ENST00000598115 845 ntBASIC1.18□□□□□ -2.22
ACLYP53396 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
ACLYP53396 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.17□□□□□ -2.22
ACLYP53396 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
ACLYP53396 RNU5A-6P-201ENST00000384136 116 ntBASIC1.17□□□□□ -2.22
ACLYP53396 RNU6-1065P-201ENST00000384513 106 ntBASIC1.17□□□□□ -2.22
ACLYP53396 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
ACLYP53396 AL606923.1-201ENST00000406616 190 ntBASIC1.17□□□□□ -2.22
ACLYP53396 EIF1P1-201ENST00000421436 341 ntBASIC1.17□□□□□ -2.22
ACLYP53396 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.17□□□□□ -2.22
ACLYP53396 RPS29P27-201ENST00000463711 170 ntBASIC1.17□□□□□ -2.22
ACLYP53396 SNORA14.1-201ENST00000516113 141 ntBASIC1.17□□□□□ -2.22
ACLYP53396 RNU6-323P-201ENST00000521915 107 ntBASIC1.17□□□□□ -2.22
ACLYP53396 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms