Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SUB1P4-201ENST00000566062 339 ntBASIC1.7□□□□□ -2.14
GPC3P51654 CTHRC1P1-201ENST00000605383 469 ntBASIC1.7□□□□□ -2.14
GPC3P51654 AL512598.1-201ENST00000610158 273 ntBASIC1.7□□□□□ -2.14
GPC3P51654 AC005520.5-201ENST00000613926 164 ntBASIC1.7□□□□□ -2.14
GPC3P51654 AC090517.2-201ENST00000614966 680 ntBASIC1.7□□□□□ -2.14
GPC3P51654 AC137590.2-201ENST00000619709 240 ntBASIC1.7□□□□□ -2.14
GPC3P51654 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.7□□□□□ -2.14
GPC3P51654 Y_RNA.89-201ENST00000363031 102 ntBASIC1.69□□□□□ -2.14
GPC3P51654 RNU6-414P-201ENST00000363705 104 ntBASIC1.69□□□□□ -2.14
GPC3P51654 RNU6-1090P-201ENST00000364065 94 ntBASIC1.69□□□□□ -2.14
GPC3P51654 RNU6-1026P-201ENST00000384465 108 ntBASIC1.69□□□□□ -2.14
GPC3P51654 Y_RNA.554-201ENST00000384672 102 ntBASIC1.69□□□□□ -2.14
GPC3P51654 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
GPC3P51654 SNORA67.6-201ENST00000391093 99 ntBASIC1.69□□□□□ -2.14
GPC3P51654 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
GPC3P51654 RNA5SP201-201ENST00000410316 124 ntBASIC1.69□□□□□ -2.14
GPC3P51654 EBAG9P1-201ENST00000418955 543 ntBASIC1.69□□□□□ -2.14
GPC3P51654 AC012306.1-201ENST00000423267 114 ntBASIC1.69□□□□□ -2.14
GPC3P51654 snoU13.9-201ENST00000458927 103 ntBASIC1.69□□□□□ -2.14
GPC3P51654 AC096745.1-201ENST00000509945 370 ntBASIC1.69□□□□□ -2.14
GPC3P51654 RNU5F-4P-201ENST00000516581 114 ntBASIC1.69□□□□□ -2.14
GPC3P51654 SNORA31.17-201ENST00000516953 127 ntBASIC1.69□□□□□ -2.14
GPC3P51654 AC104576.1-201ENST00000524225 88 ntBASIC1.69□□□□□ -2.14
GPC3P51654 EIF4A1P12-201ENST00000551910 141 ntBASIC1.69□□□□□ -2.14
GPC3P51654 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.69□□□□□ -2.14
GPC3P51654 AC015720.1-201ENST00000565251 277 ntBASIC1.69□□□□□ -2.14
GPC3P51654 AC078795.3-201ENST00000602913 472 ntBASIC1.69□□□□□ -2.14
GPC3P51654 Z98751.3-201ENST00000604447 521 ntBASIC1.69□□□□□ -2.14
GPC3P51654 MIR8076-201ENST00000611401 83 ntBASIC1.69□□□□□ -2.14
GPC3P51654 PCGEM1.1-201ENST00000613431 131 ntBASIC1.69□□□□□ -2.14
GPC3P51654 RNU4-13P-201ENST00000364019 141 ntBASIC1.68□□□□□ -2.14
GPC3P51654 SNORA32.2-201ENST00000384049 122 ntBASIC1.68□□□□□ -2.14
GPC3P51654 RNU6-1013P-201ENST00000384180 107 ntBASIC1.68□□□□□ -2.14
GPC3P51654 RNU6-332P-201ENST00000391193 108 ntBASIC1.68□□□□□ -2.14
GPC3P51654 RNU6-174P-201ENST00000410406 106 ntBASIC1.68□□□□□ -2.14
GPC3P51654 Y_RNA.615-201ENST00000410769 117 ntBASIC1.68□□□□□ -2.14
GPC3P51654 AL513185.2-201ENST00000425543 193 ntBASIC1.68□□□□□ -2.14
GPC3P51654 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.68□□□□□ -2.14
GPC3P51654 SNRPEP8-201ENST00000442866 260 ntBASIC1.68□□□□□ -2.14
GPC3P51654 AC087477.1-201ENST00000465747 340 ntBASIC1.68□□□□□ -2.14
GPC3P51654 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.68□□□□□ -2.14
GPC3P51654 AC097473.1-201ENST00000508142 408 ntBASIC1.68□□□□□ -2.14
GPC3P51654 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.68□□□□□ -2.14
GPC3P51654 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.68□□□□□ -2.14
GPC3P51654 RNU6-1053P-201ENST00000515930 101 ntBASIC1.68□□□□□ -2.14
GPC3P51654 MIR5094-201ENST00000578766 85 ntBASIC1.68□□□□□ -2.14
GPC3P51654 CPDP1-201ENST00000579660 283 ntBASIC1.68□□□□□ -2.14
GPC3P51654 FGF7P1-201ENST00000582820 288 ntBASIC1.68□□□□□ -2.14
GPC3P51654 uc_338.5-201ENST00000611839 155 ntBASIC1.68□□□□□ -2.14
GPC3P51654 FAM157A-202ENST00000615155 405 ntBASIC1.68□□□□□ -2.14
GPC3P51654 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.68□□□□□ -2.14
GPC3P51654 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.68□□□□□ -2.14
GPC3P51654 AL359697.1-201ENST00000624879 587 ntBASIC1.68□□□□□ -2.14
GPC3P51654 AC024614.3-201ENST00000637860 256 ntBASIC1.68□□□□□ -2.14
GPC3P51654 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.68□□□□□ -2.14
GPC3P51654 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
GPC3P51654 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
GPC3P51654 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
GPC3P51654 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
GPC3P51654 Y_RNA.67-201ENST00000362870 100 ntBASIC1.67□□□□□ -2.14
GPC3P51654 RNU6-1317P-201ENST00000364582 104 ntBASIC1.67□□□□□ -2.14
GPC3P51654 RNU6-534P-201ENST00000364877 106 ntBASIC1.67□□□□□ -2.14
GPC3P51654 Y_RNA.295-201ENST00000364918 102 ntBASIC1.67□□□□□ -2.14
GPC3P51654 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
GPC3P51654 RNU6-338P-201ENST00000383888 105 ntBASIC1.67□□□□□ -2.14
GPC3P51654 Y_RNA.414-201ENST00000384011 101 ntBASIC1.67□□□□□ -2.14
GPC3P51654 FCF1P9-201ENST00000412546 282 ntBASIC1.67□□□□□ -2.14
GPC3P51654 RPL21P111-201ENST00000418453 477 ntBASIC1.67□□□□□ -2.14
GPC3P51654 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.67□□□□□ -2.14
GPC3P51654 EIF1P1-201ENST00000421436 341 ntBASIC1.67□□□□□ -2.14
GPC3P51654 AC139712.2-201ENST00000424302 339 ntBASIC1.67□□□□□ -2.14
GPC3P51654 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GPC3P51654 UBE2V1P8-201ENST00000437166 265 ntBASIC1.67□□□□□ -2.14
GPC3P51654 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.67□□□□□ -2.14
GPC3P51654 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.67□□□□□ -2.14
GPC3P51654 RPS29P27-201ENST00000463711 170 ntBASIC1.67□□□□□ -2.14
GPC3P51654 AC010409.1-201ENST00000487382 476 ntBASIC1.67□□□□□ -2.14
GPC3P51654 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.67□□□□□ -2.14
GPC3P51654 SUB1P3-201ENST00000564581 315 ntBASIC1.67□□□□□ -2.14
GPC3P51654 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.67□□□□□ -2.14
GPC3P51654 MIR4422-201ENST00000581938 83 ntBASIC1.67□□□□□ -2.14
GPC3P51654 AC068790.6-201ENST00000602558 258 ntBASIC1.67□□□□□ -2.14
GPC3P51654 AP003465.2-201ENST00000602571 373 ntBASIC1.67□□□□□ -2.14
GPC3P51654 MIR3688-2-201ENST00000636963 87 ntBASIC1.67□□□□□ -2.14
GPC3P51654 Y_RNA.212-201ENST00000364177 102 ntBASIC1.66□□□□□ -2.14
GPC3P51654 RNU6-439P-201ENST00000384188 106 ntBASIC1.66□□□□□ -2.14
GPC3P51654 RNU6-192P-201ENST00000391253 100 ntBASIC1.66□□□□□ -2.14
GPC3P51654 MIR208B-201ENST00000401172 77 ntBASIC1.66□□□□□ -2.14
GPC3P51654 MIR1277-201ENST00000408536 78 ntBASIC1.66□□□□□ -2.14
GPC3P51654 RNU6-325P-201ENST00000411132 105 ntBASIC1.66□□□□□ -2.14
GPC3P51654 MTND3P9-201ENST00000429526 346 ntBASIC1.66□□□□□ -2.14
GPC3P51654 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.66□□□□□ -2.14
GPC3P51654 RNU7-14P-201ENST00000459331 62 ntBASIC1.66□□□□□ -2.14
GPC3P51654 RNU6-256P-201ENST00000516747 97 ntBASIC1.66□□□□□ -2.14
GPC3P51654 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
GPC3P51654 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.66□□□□□ -2.14
GPC3P51654 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
GPC3P51654 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.66□□□□□ -2.14
GPC3P51654 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.66□□□□□ -2.14
GPC3P51654 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms