Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 HMGB1P35-201ENST00000503360 598 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RNU6-327P-201ENST00000516270 127 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 AC006504.6-201ENST00000590142 199 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 AC022432.1-201ENST00000595739 310 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 AL450472.1-202ENST00000637286 180 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HCFC1P51610 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.88□□□□□ -2.11
HCFC1P51610 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.88□□□□□ -2.11
HCFC1P51610 RNU5B-2P-201ENST00000363036 113 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 Y_RNA.128-201ENST00000363391 112 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RNU6-474P-201ENST00000384243 107 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RNU6-1011P-201ENST00000384668 107 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 MIR221-201ENST00000385135 110 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 MIR628-201ENST00000385229 95 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RNU6-700P-201ENST00000391043 107 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 SNORA40.18-201ENST00000391200 128 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RNU2-2P-201ENST00000410396 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RNA5SP494-201ENST00000410653 129 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.88□□□□□ -2.11
HCFC1P51610 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.88□□□□□ -2.11
HCFC1P51610 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.88□□□□□ -2.11
HCFC1P51610 MIR2053-201ENST00000459295 91 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 TOMM22P6-201ENST00000465035 409 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RPL30P1-201ENST00000488676 339 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RPL22P13-201ENST00000493291 347 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 GZMAP1-201ENST00000503054 631 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RNU6-1198P-201ENST00000516904 67 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RN7SKP40-201ENST00000517211 242 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.88□□□□□ -2.11
HCFC1P51610 AL442163.3-201ENST00000554110 156 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 AC091152.3-201ENST00000604227 325 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 AC005014.2-201ENST00000607795 599 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.15-201ENST00000611544 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.16-201ENST00000613119 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.12-201ENST00000613778 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.20-201ENST00000613956 192 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.9-201ENST00000615427 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.11-201ENST00000616345 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.2-201ENST00000616535 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.3-201ENST00000617785 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 AC007742.2-201ENST00000618226 398 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.19-201ENST00000618602 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 RNU2-1-201ENST00000618664 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.6-201ENST00000619225 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.5-201ENST00000619465 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 U2.10-201ENST00000620268 191 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.88□□□□□ -2.11
HCFC1P51610 AC005336.3-201ENST00000623833 2679 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.87□□□□□ -2.11
HCFC1P51610 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HCFC1P51610 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.87□□□□□ -2.11
HCFC1P51610 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
HCFC1P51610 Y_RNA.5-201ENST00000362334 102 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 SNORD114-19-201ENST00000363072 75 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 Y_RNA.358-201ENST00000365491 99 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 SET-203ENST00000372688 801 ntTSL 2 BASIC1.87□□□□□ -2.11
HCFC1P51610 Y_RNA.395-201ENST00000383945 109 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 Y_RNA.504-201ENST00000384481 104 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HCFC1P51610 SNORA12.2-201ENST00000391040 156 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 RPS26P42-201ENST00000413485 326 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 PMCHL1-202ENST00000423102 261 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.87□□□□□ -2.11
HCFC1P51610 RPL23AP58-201ENST00000440453 469 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 AC068781.1-201ENST00000488231 618 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 AC093852.1-201ENST00000503587 266 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 RNU6-976P-201ENST00000516086 111 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 RN7SKP295-201ENST00000517264 153 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.87□□□□□ -2.11
HCFC1P51610 HSPE1P4-201ENST00000550617 308 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.87□□□□□ -2.11
HCFC1P51610 MIR3923-201ENST00000579521 83 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.87□□□□□ -2.11
HCFC1P51610 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.87□□□□□ -2.11
HCFC1P51610 AC087588.2-201ENST00000617667 426 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HCFC1P51610 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.87□□□□□ -2.11
HCFC1P51610 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HCFC1P51610 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HCFC1P51610 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
HCFC1P51610 Y_RNA.216-201ENST00000364205 93 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 RNU1-138P-201ENST00000384093 164 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 MRPL35P1-201ENST00000404272 572 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 U6atac.2-201ENST00000408644 118 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 AL139109.1-201ENST00000455491 297 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.86□□□□□ -2.11
HCFC1P51610 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.86□□□□□ -2.11
HCFC1P51610 RNU7-175P-201ENST00000515915 61 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 RNU6-120P-201ENST00000516077 103 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 SNORA31.11-201ENST00000516528 139 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 SCARNA16.3-201ENST00000516595 184 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 AC020661.2-201ENST00000560114 134 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 AC104581.2-201ENST00000572227 430 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 AC113195.1-201ENST00000579952 141 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 Z98751.3-201ENST00000604447 521 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 AC100812.1-201ENST00000607622 580 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 AL449363.1-201ENST00000617815 186 ntBASIC1.86□□□□□ -2.11
HCFC1P51610 MIR4272-201ENST00000635924 64 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms