Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RNA5SP432-201ENST00000362480 116 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 U3.9-201ENST00000363823 204 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 SNORA63C-201ENST00000364578 129 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 SET-203ENST00000372688 801 ntTSL 2 BASIC2.78□□□□□ -1.96
CPT1AP50416 Y_RNA.645-201ENST00000391229 102 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 RNU1-139P-201ENST00000391307 165 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.78□□□□□ -1.96
CPT1AP50416 AC080013.2-201ENST00000460866 323 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 AC234781.5-201ENST00000508429 271 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 RNU6-1114P-201ENST00000516022 107 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 RNA5SP54-201ENST00000516951 92 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 RNU6-1137P-201ENST00000517073 99 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 CBX3P7-201ENST00000532876 502 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 EIF4A1P12-201ENST00000551910 141 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 PART1_1.1-201ENST00000611761 217 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.78□□□□□ -1.96
CPT1AP50416 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CPT1AP50416 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CPT1AP50416 Y_RNA.424-201ENST00000384063 103 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 RNU6-738P-201ENST00000384531 106 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 RNU6-159P-201ENST00000391080 106 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CPT1AP50416 MTND2P23-201ENST00000422990 651 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.77□□□□□ -1.97
CPT1AP50416 AL356320.1-201ENST00000429616 163 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 WARS2P1-201ENST00000429678 537 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 AL445305.1-201ENST00000432577 575 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.77□□□□□ -1.97
CPT1AP50416 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.77□□□□□ -1.97
CPT1AP50416 AC007215.1-201ENST00000464893 276 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 AC090515.1-201ENST00000465295 476 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 AC107032.1-201ENST00000485945 480 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 AC132942.1-201ENST00000486753 483 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 RNU6-327P-201ENST00000516270 127 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 MIR2355-201ENST00000517199 87 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 AC022868.1-201ENST00000517767 391 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.77□□□□□ -1.97
CPT1AP50416 UBL5P4-201ENST00000562584 236 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 AC016727.2-201ENST00000603988 621 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.77□□□□□ -1.97
CPT1AP50416 AL162373.1-201ENST00000620433 407 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.77□□□□□ -1.97
CPT1AP50416 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.77□□□□□ -1.97
CPT1AP50416 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CPT1AP50416 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CPT1AP50416 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CPT1AP50416 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.76□□□□□ -1.97
CPT1AP50416 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CPT1AP50416 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CPT1AP50416 RNA5SP456-201ENST00000364002 114 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CPT1AP50416 Y_RNA.527-201ENST00000384573 102 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 MIR10B-201ENST00000385011 110 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 MIR549A-201ENST00000385268 96 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 SNORA12-201ENST00000391162 147 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 MTCO3P19-201ENST00000415864 321 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 AC113618.1-201ENST00000416747 285 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.76□□□□□ -1.97
CPT1AP50416 AC103975.1-201ENST00000482506 483 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 RPS29P21-201ENST00000496272 170 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 HSPE1P18-201ENST00000517602 280 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.76□□□□□ -1.97
CPT1AP50416 MIR5695-201ENST00000579717 85 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 MIR5092-201ENST00000583139 88 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 MIR3117-201ENST00000584034 78 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 AC104695.3-201ENST00000604052 296 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 ZNF204P-201ENST00000416749 2397 ntBASIC2.76□□□□□ -1.97
CPT1AP50416 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CPT1AP50416 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.75□□□□□ -1.97
CPT1AP50416 SNORD14.1-201ENST00000365609 90 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 Y_RNA.389-201ENST00000383924 113 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 RNU6-1274P-201ENST00000384557 107 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 MIR181B1-201ENST00000385240 110 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 RNU6-220P-201ENST00000390919 107 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 Y_RNA.597-201ENST00000410463 100 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.75□□□□□ -1.97
CPT1AP50416 EIF1P2-201ENST00000428233 350 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.75□□□□□ -1.97
CPT1AP50416 RNU6-586P-201ENST00000517265 104 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.75□□□□□ -1.97
CPT1AP50416 AC090616.3-201ENST00000582184 217 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 AC023043.3-201ENST00000593113 385 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 AL356575.1-201ENST00000603008 283 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 AL356280.1-201ENST00000603614 379 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 AC005296.1-201ENST00000616145 209 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 MIR5739-201ENST00000619803 80 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.75□□□□□ -1.97
CPT1AP50416 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.75□□□□□ -1.97
CPT1AP50416 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CPT1AP50416 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CPT1AP50416 BX322639.1-202ENST00000423987 2213 ntBASIC2.74□□□□□ -1.97
CPT1AP50416 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.74□□□□□ -1.97
CPT1AP50416 Y_RNA.145-201ENST00000363527 102 ntBASIC2.74□□□□□ -1.97
CPT1AP50416 RNU6-879P-201ENST00000364328 108 ntBASIC2.74□□□□□ -1.97
CPT1AP50416 MIR504-201ENST00000385065 83 ntBASIC2.74□□□□□ -1.97
CPT1AP50416 RNA5SP213-201ENST00000391031 106 ntBASIC2.74□□□□□ -1.97
CPT1AP50416 RNA5SP210-201ENST00000391034 120 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms