Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AC005668.1-201ENST00000571142 476 ntBASIC1.37□□□□□ -2.19
MDH1P40925 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.37□□□□□ -2.19
MDH1P40925 MIR8076-201ENST00000611401 83 ntBASIC1.37□□□□□ -2.19
MDH1P40925 AL078604.3-201ENST00000615580 211 ntBASIC1.37□□□□□ -2.19
MDH1P40925 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.37□□□□□ -2.19
MDH1P40925 OR5AK4P-201ENST00000635912 903 ntBASIC1.37□□□□□ -2.19
MDH1P40925 AC090582.1-201ENST00000636321 199 ntBASIC1.37□□□□□ -2.19
MDH1P40925 RNU6-1305P-201ENST00000364353 104 ntBASIC1.36□□□□□ -2.19
MDH1P40925 SNORA69-201ENST00000383895 132 ntBASIC1.36□□□□□ -2.19
MDH1P40925 MIR586-201ENST00000385035 97 ntBASIC1.36□□□□□ -2.19
MDH1P40925 RNU6-325P-201ENST00000411132 105 ntBASIC1.36□□□□□ -2.19
MDH1P40925 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.36□□□□□ -2.19
MDH1P40925 RPS27P16-201ENST00000425758 201 ntBASIC1.36□□□□□ -2.19
MDH1P40925 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
MDH1P40925 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.36□□□□□ -2.19
MDH1P40925 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.36□□□□□ -2.19
MDH1P40925 AC016717.1-201ENST00000448918 286 ntBASIC1.36□□□□□ -2.19
MDH1P40925 RNU6-1208P-201ENST00000459588 107 ntBASIC1.36□□□□□ -2.19
MDH1P40925 RPS26P45-201ENST00000471748 340 ntBASIC1.36□□□□□ -2.19
MDH1P40925 AC010486.3-201ENST00000511602 785 ntBASIC1.36□□□□□ -2.19
MDH1P40925 RNU6-548P-201ENST00000517083 115 ntBASIC1.36□□□□□ -2.19
MDH1P40925 MRPS36P4-201ENST00000534436 298 ntBASIC1.36□□□□□ -2.19
MDH1P40925 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.36□□□□□ -2.19
MDH1P40925 AL118558.2-201ENST00000556294 238 ntBASIC1.36□□□□□ -2.19
MDH1P40925 MTND3P12-201ENST00000559068 328 ntBASIC1.36□□□□□ -2.19
MDH1P40925 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.36□□□□□ -2.19
MDH1P40925 AC092807.2-201ENST00000609367 243 ntBASIC1.36□□□□□ -2.19
MDH1P40925 RMST_3.1-201ENST00000611651 109 ntBASIC1.36□□□□□ -2.19
MDH1P40925 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
MDH1P40925 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
MDH1P40925 MIR549A-201ENST00000385268 96 ntBASIC1.35□□□□□ -2.19
MDH1P40925 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
MDH1P40925 EIF1P1-201ENST00000421436 341 ntBASIC1.35□□□□□ -2.19
MDH1P40925 HMGN2P34-201ENST00000437647 269 ntBASIC1.35□□□□□ -2.19
MDH1P40925 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.35□□□□□ -2.19
MDH1P40925 SRRM1P2-201ENST00000464531 1192 ntBASIC1.35□□□□□ -2.19
MDH1P40925 RPL30P7-201ENST00000479312 323 ntBASIC1.35□□□□□ -2.19
MDH1P40925 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.35□□□□□ -2.19
MDH1P40925 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.35□□□□□ -2.19
MDH1P40925 MTND1P35-201ENST00000526739 508 ntBASIC1.35□□□□□ -2.19
MDH1P40925 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.35□□□□□ -2.19
MDH1P40925 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.35□□□□□ -2.19
MDH1P40925 RAB11AP2-201ENST00000545905 639 ntBASIC1.35□□□□□ -2.19
MDH1P40925 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.35□□□□□ -2.19
MDH1P40925 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
MDH1P40925 AC100830.2-201ENST00000581636 240 ntBASIC1.35□□□□□ -2.19
MDH1P40925 AL355802.3-201ENST00000607571 545 ntBASIC1.35□□□□□ -2.19
MDH1P40925 AC073534.2-201ENST00000620377 381 ntBASIC1.35□□□□□ -2.19
MDH1P40925 AC006001.4-201ENST00000622243 395 ntBASIC1.35□□□□□ -2.19
MDH1P40925 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.34□□□□□ -2.19
MDH1P40925 RNU4-13P-201ENST00000364019 141 ntBASIC1.34□□□□□ -2.19
MDH1P40925 RNA5SP190-201ENST00000365222 118 ntBASIC1.34□□□□□ -2.19
MDH1P40925 Y_RNA.359-201ENST00000365498 102 ntBASIC1.34□□□□□ -2.19
MDH1P40925 RNU6-203P-201ENST00000384038 104 ntBASIC1.34□□□□□ -2.19
MDH1P40925 RNA5SP323-201ENST00000391094 133 ntBASIC1.34□□□□□ -2.19
MDH1P40925 SNRPEP10-201ENST00000420249 274 ntBASIC1.34□□□□□ -2.19
MDH1P40925 AL591806.2-201ENST00000433122 173 ntBASIC1.34□□□□□ -2.19
MDH1P40925 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.34□□□□□ -2.19
MDH1P40925 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
MDH1P40925 RNU7-34P-201ENST00000459394 64 ntBASIC1.34□□□□□ -2.19
MDH1P40925 AL163195.1-201ENST00000496941 348 ntBASIC1.34□□□□□ -2.19
MDH1P40925 AC092436.3-201ENST00000511788 257 ntBASIC1.34□□□□□ -2.19
MDH1P40925 MIR4298-201ENST00000584380 73 ntBASIC1.34□□□□□ -2.19
MDH1P40925 AP003465.2-201ENST00000602571 373 ntBASIC1.34□□□□□ -2.19
MDH1P40925 AL078596.1-201ENST00000624856 447 ntBASIC1.34□□□□□ -2.19
MDH1P40925 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MDH1P40925 RNU6-784P-201ENST00000384330 106 ntBASIC1.33□□□□□ -2.2
MDH1P40925 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
MDH1P40925 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
MDH1P40925 SNX2P2-201ENST00000424553 323 ntBASIC1.33□□□□□ -2.2
MDH1P40925 MTND3P16-201ENST00000452205 344 ntBASIC1.33□□□□□ -2.2
MDH1P40925 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.33□□□□□ -2.2
MDH1P40925 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.33□□□□□ -2.2
MDH1P40925 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.33□□□□□ -2.2
MDH1P40925 RNU6-1332P-201ENST00000516666 104 ntBASIC1.33□□□□□ -2.2
MDH1P40925 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
MDH1P40925 AC024995.1-201ENST00000523014 93 ntBASIC1.33□□□□□ -2.2
MDH1P40925 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
MDH1P40925 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MDH1P40925 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.33□□□□□ -2.2
MDH1P40925 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
MDH1P40925 AL050343.2-201ENST00000607338 280 ntBASIC1.33□□□□□ -2.2
MDH1P40925 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.33□□□□□ -2.2
MDH1P40925 SCARNA4-201ENST00000629045 128 ntBASIC1.33□□□□□ -2.2
MDH1P40925 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.33□□□□□ -2.2
MDH1P40925 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
MDH1P40925 RNU6-1085P-201ENST00000363576 107 ntBASIC1.32□□□□□ -2.2
MDH1P40925 RNU6-534P-201ENST00000364877 106 ntBASIC1.32□□□□□ -2.2
MDH1P40925 RNU4-20P-201ENST00000365601 151 ntBASIC1.32□□□□□ -2.2
MDH1P40925 Y_RNA.409-201ENST00000383990 98 ntBASIC1.32□□□□□ -2.2
MDH1P40925 RNU6-57P-201ENST00000411348 103 ntBASIC1.32□□□□□ -2.2
MDH1P40925 AC004965.1-201ENST00000413033 213 ntBASIC1.32□□□□□ -2.2
MDH1P40925 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.32□□□□□ -2.2
MDH1P40925 AL513185.2-201ENST00000425543 193 ntBASIC1.32□□□□□ -2.2
MDH1P40925 USP9YP14-201ENST00000430663 563 ntBASIC1.32□□□□□ -2.2
MDH1P40925 MTCO2P16-201ENST00000436962 677 ntBASIC1.32□□□□□ -2.2
MDH1P40925 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.32□□□□□ -2.2
MDH1P40925 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.32□□□□□ -2.2
MDH1P40925 RNU7-57P-201ENST00000459540 60 ntBASIC1.32□□□□□ -2.2
MDH1P40925 AF186996.7-201ENST00000492781 209 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms