Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 MTND4LP16-201ENST00000440828 295 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 AL035666.1-201ENST00000446195 348 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 AC130509.1-201ENST00000464158 433 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 RPS23P5-201ENST00000495419 428 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM23P36406 MTCO2P30-201ENST00000503662 364 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 MIR449C-201ENST00000516047 92 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM23P36406 AC090517.1-201ENST00000569307 266 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM23P36406 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.73□□□□□ -2.13
TRIM23P36406 AC124303.1-201ENST00000605703 360 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 AC007014.2-201ENST00000615581 479 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.73□□□□□ -2.13
TRIM23P36406 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM23P36406 RNU6-1252P-201ENST00000363054 104 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 RNA5SP99-201ENST00000364020 114 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 RNU6-790P-201ENST00000384479 105 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TRIM23P36406 RNA5SP213-201ENST00000391031 106 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 RNU6-1093P-201ENST00000391194 107 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 RNU6-510P-201ENST00000391239 108 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 AC016925.1-201ENST00000458303 298 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 ACA59.1-201ENST00000515966 143 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 RNU6-718P-201ENST00000516166 105 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 SNORA25.15-201ENST00000516487 89 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 RNU5F-4P-201ENST00000516581 114 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 AF235103.2-201ENST00000525753 346 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM23P36406 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.72□□□□□ -2.13
TRIM23P36406 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM23P36406 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 AC010928.2-201ENST00000588017 287 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 POLR3GP2-201ENST00000588366 668 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 AC018638.8-201ENST00000588755 281 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 SCARNA4-201ENST00000629045 128 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 AC027514.1-201ENST00000588561 1603 ntBASIC1.72□□□□□ -2.13
TRIM23P36406 LINC02555-201ENST00000563933 1951 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 SNORD50.1-201ENST00000362987 71 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 Y_RNA.151-201ENST00000363566 112 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 SNORD115-8-201ENST00000363856 82 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 SNORD115-32-201ENST00000364079 82 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 SNORD115-38-201ENST00000365037 82 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 SNORA32.2-201ENST00000384049 122 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 RNU6-831P-201ENST00000384548 107 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 MIR517A-201ENST00000385001 87 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 MIR300-201ENST00000401138 83 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 RNA5SP501-201ENST00000410990 112 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 AC079354.2-201ENST00000453523 154 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 AC092989.1-201ENST00000481235 277 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 RNU6-1098P-201ENST00000516772 96 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 MRPS36P4-201ENST00000534436 298 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 MIR3976-201ENST00000606807 139 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 TCL6_2.1-201ENST00000615162 119 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 U6atac.1-201ENST00000616025 117 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.71□□□□□ -2.14
TRIM23P36406 AC100810.6-201ENST00000638068 285 ntBASIC1.71□□□□□ -2.14
TRIM23P36406 RNU6-137P-201ENST00000363680 108 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 RNU4-9P-201ENST00000364951 139 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 RNA5SP190-201ENST00000365222 118 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 RNU6-438P-201ENST00000365561 103 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM23P36406 MIR320B2-201ENST00000408479 138 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM23P36406 HMGB1P18-201ENST00000438801 619 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM23P36406 MTND1P17-201ENST00000448961 204 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AC007395.1-201ENST00000451333 677 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 TOMM22P6-201ENST00000465035 409 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 RPL23AP75-201ENST00000491601 451 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AC082651.2-201ENST00000496833 166 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 ATP5EP1-201ENST00000510257 156 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 RNU6-566P-201ENST00000516790 107 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 RNU6-1198P-201ENST00000516904 67 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 RNA5SP54-201ENST00000516951 92 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM23P36406 MIR3942-201ENST00000585264 109 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AP000907.4-201ENST00000604143 237 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AC019193.3-201ENST00000609144 554 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 MIR8081-201ENST00000611533 95 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AC092794.1-201ENST00000612734 582 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AC093913.1-201ENST00000614178 329 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 AC005562.2-201ENST00000618264 111 ntBASIC1.7□□□□□ -2.14
TRIM23P36406 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM23P36406 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM23P36406 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM23P36406 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.7□□□□□ -2.14
TRIM23P36406 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM23P36406 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.69□□□□□ -2.14
TRIM23P36406 BX322639.1-202ENST00000423987 2213 ntBASIC1.69□□□□□ -2.14
TRIM23P36406 CBX3P1-201ENST00000325243 554 ntBASIC1.69□□□□□ -2.14
TRIM23P36406 Y_RNA.72-201ENST00000362894 103 ntBASIC1.69□□□□□ -2.14
TRIM23P36406 RNA5SP493-201ENST00000364115 91 ntBASIC1.69□□□□□ -2.14
TRIM23P36406 Y_RNA.301-201ENST00000364990 103 ntBASIC1.69□□□□□ -2.14
TRIM23P36406 RNU6-1148P-201ENST00000410992 104 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms