Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.05□□□□□ -2.42
SDC4P31431 OR9P1P-201ENST00000496431 281 ntBASIC-0.05□□□□□ -2.42
SDC4P31431 AC093534.1-201ENST00000504977 132 ntBASIC-0.05□□□□□ -2.42
SDC4P31431 AC004223.2-201ENST00000590309 544 ntBASIC-0.05□□□□□ -2.42
SDC4P31431 AL162424.1-201ENST00000602325 221 ntBASIC-0.05□□□□□ -2.42
SDC4P31431 Z99497.2-201ENST00000603634 310 ntBASIC-0.05□□□□□ -2.42
SDC4P31431 Z99289.3-201ENST00000605586 594 ntBASIC-0.05□□□□□ -2.42
SDC4P31431 AL356596.1-201ENST00000624230 379 ntBASIC-0.05□□□□□ -2.42
SDC4P31431 AP000568.1-201ENST00000282964 442 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.06□□□□□ -2.42
SDC4P31431 RNU6-552P-201ENST00000362869 119 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 SNORA2.2-201ENST00000365473 135 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 RNU6-25P-201ENST00000383873 107 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 RNU6-48P-201ENST00000384161 107 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 RNU6-15P-201ENST00000384534 107 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 RNU6-29P-201ENST00000384637 107 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 MIR32-201ENST00000384965 70 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 RNU6-177P-201ENST00000411257 104 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 AC016909.1-201ENST00000415916 166 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 MTCYBP10-201ENST00000424905 650 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.06□□□□□ -2.42
SDC4P31431 RPL17P35-201ENST00000432217 549 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 MTND1P32-201ENST00000433043 938 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 MTND4LP16-201ENST00000440828 295 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.06□□□□□ -2.42
SDC4P31431 MTND1P22-201ENST00000510572 951 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 RNU6-948P-201ENST00000516374 107 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 AC109479.2-201ENST00000517842 174 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 LRRC6P1-201ENST00000532188 885 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.06□□□□□ -2.42
SDC4P31431 MIR1273G-201ENST00000577677 100 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.06□□□□□ -2.42
SDC4P31431 AC234772.3-201ENST00000602277 528 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 AC004832.4-201ENST00000608952 331 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 AL359697.1-201ENST00000624879 587 ntBASIC-0.06□□□□□ -2.42
SDC4P31431 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.07□□□□□ -2.42
SDC4P31431 RNU6-433P-201ENST00000363216 104 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 RNU6-815P-201ENST00000384080 113 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 RNU6-298P-201ENST00000390888 96 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 MIR208B-201ENST00000401172 77 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 MTCO2P7-201ENST00000446518 666 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.07□□□□□ -2.42
SDC4P31431 AC079395.1-201ENST00000510981 262 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 RNU6-567P-201ENST00000516746 107 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 MIR4768-201ENST00000585270 74 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 AC005520.5-201ENST00000613926 164 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 AC008133.2-201ENST00000624540 351 ntBASIC-0.07□□□□□ -2.42
SDC4P31431 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.07□□□□□ -2.42
SDC4P31431 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 SNORD114-16-201ENST00000363044 70 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 RNU6-560P-201ENST00000364007 108 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 RNU6-975P-201ENST00000384296 105 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.08□□□□□ -2.42
SDC4P31431 CDK8P2-201ENST00000415020 547 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 AL358176.2-201ENST00000425769 204 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 CALM2P4-201ENST00000430810 426 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 MTCO1P19-201ENST00000443487 500 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.08□□□□□ -2.42
SDC4P31431 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.08□□□□□ -2.42
SDC4P31431 RNU6-377P-201ENST00000515965 102 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 AC022868.1-201ENST00000517767 391 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.08□□□□□ -2.42
SDC4P31431 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.08□□□□□ -2.42
SDC4P31431 EIF1P4-201ENST00000572664 335 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 MIR4753-201ENST00000585119 83 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.08□□□□□ -2.42
SDC4P31431 AP002360.4-201ENST00000606980 481 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.08□□□□□ -2.42
SDC4P31431 AC122133.1-201ENST00000613964 233 ntBASIC-0.08□□□□□ -2.42
SDC4P31431 RNU6-562P-201ENST00000362731 107 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 U3.4-201ENST00000363352 213 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 SNORD105-201ENST00000386910 85 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 MRPL42P3-201ENST00000401492 326 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 RPS3AP3-201ENST00000411933 242 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 MTCO2P34-201ENST00000421994 607 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.09□□□□□ -2.42
SDC4P31431 TPT1P7-201ENST00000458300 517 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 AC079382.1-201ENST00000493346 557 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 MTCO3P27-201ENST00000514397 196 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 RNU1-142P-201ENST00000516682 145 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 RNU7-128P-201ENST00000517247 62 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 AL391840.1-201ENST00000571144 367 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 AC146944.4-201ENST00000602697 718 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 MTND3P19-201ENST00000603825 345 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 AC091805.2-201ENST00000603848 235 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 AC068880.4-201ENST00000623082 495 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 OR5AK4P-201ENST00000635912 903 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 MIR4315-1-201ENST00000636800 73 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 MIR4315-2-201ENST00000640925 73 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 AL163152.1-201ENST00000642001 374 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.09□□□□□ -2.42
SDC4P31431 SNORA25.3-201ENST00000363205 127 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 RNU6-723P-201ENST00000383973 107 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 U8.16-201ENST00000391279 133 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 MIR1253-201ENST00000408273 105 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 MIR1185-1-201ENST00000408598 86 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 RNU6-607P-201ENST00000411283 108 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 AL133396.1-201ENST00000432048 687 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms