Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HOXD11P31277 RNA5SP187-201ENST00000384400 119 ntBASIC5.63□□□□□ -1.51
HOXD11P31277 RNU6-160P-201ENST00000384591 107 ntBASIC5.63□□□□□ -1.51
HOXD11P31277 MIR3064-201ENST00000581130 66 ntBASIC5.63□□□□□ -1.51
HOXD11P31277 AL357312.1-201ENST00000603879 298 ntBASIC5.63□□□□□ -1.51
HOXD11P31277 AL391358.1-201ENST00000605342 190 ntBASIC5.63□□□□□ -1.51
HOXD11P31277 AC005000.2-201ENST00000605468 310 ntBASIC5.63□□□□□ -1.51
HOXD11P31277 MIR5739-201ENST00000619803 80 ntBASIC5.63□□□□□ -1.51
HOXD11P31277 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD11P31277 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD11P31277 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
HOXD11P31277 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXD11P31277 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HOXD11P31277 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD11P31277 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXD11P31277 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD11P31277 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD11P31277 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
HOXD11P31277 RNU6-330P-201ENST00000363015 107 ntBASIC5.62□□□□□ -1.51
HOXD11P31277 RNU6-833P-201ENST00000363486 107 ntBASIC5.62□□□□□ -1.51
HOXD11P31277 SNORA43.1-201ENST00000364863 140 ntBASIC5.62□□□□□ -1.51
HOXD11P31277 AL606517.2-201ENST00000442855 241 ntBASIC5.62□□□□□ -1.51
HOXD11P31277 AC007224.1-201ENST00000564410 144 ntBASIC5.62□□□□□ -1.51
HOXD11P31277 AL139099.4-201ENST00000614802 114 ntBASIC5.62□□□□□ -1.51
HOXD11P31277 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HOXD11P31277 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXD11P31277 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD11P31277 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
HOXD11P31277 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD11P31277 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD11P31277 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD11P31277 RNU6-1067P-201ENST00000384752 107 ntBASIC5.61□□□□□ -1.51
HOXD11P31277 RNA5SP332-201ENST00000391063 115 ntBASIC5.61□□□□□ -1.51
HOXD11P31277 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXD11P31277 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD11P31277 MIR5195-201ENST00000583555 115 ntBASIC5.61□□□□□ -1.51
HOXD11P31277 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC5.61□□□□□ -1.51
HOXD11P31277 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXD11P31277 AL132640.3-201ENST00000630473 177 ntBASIC5.61□□□□□ -1.51
HOXD11P31277 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HOXD11P31277 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXD11P31277 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD11P31277 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXD11P31277 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXD11P31277 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD11P31277 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXD11P31277 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXD11P31277 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD11P31277 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD11P31277 DNM1P47-203ENST00000571780 12667 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD11P31277 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD11P31277 MIR136-201ENST00000385207 82 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXD11P31277 RNU2-58P-201ENST00000516403 183 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 SNORA67.7-201ENST00000516664 135 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 RNA5SP143-201ENST00000516936 115 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 Y_RNA.722-201ENST00000517279 114 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 AC008033.2-201ENST00000542626 177 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 MIR4277-201ENST00000578298 84 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 SNX18P1Y-201ENST00000616231 511 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 MIR8065-201ENST00000620577 100 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD11P31277 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD11P31277 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD11P31277 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD11P31277 AL161722.3-201ENST00000605789 2983 ntBASIC5.6□□□□□ -1.51
HOXD11P31277 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HOXD11P31277 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
HOXD11P31277 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD11P31277 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD11P31277 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD11P31277 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD11P31277 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
HOXD11P31277 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD11P31277 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HOXD11P31277 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD11P31277 RNU6-862P-201ENST00000362804 105 ntBASIC5.59□□□□□ -1.51
HOXD11P31277 RN7SKP17-201ENST00000411242 351 ntBASIC5.59□□□□□ -1.51
HOXD11P31277 RNU6-513P-201ENST00000516104 104 ntBASIC5.59□□□□□ -1.51
HOXD11P31277 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD11P31277 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD11P31277 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD11P31277 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HOXD11P31277 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXD11P31277 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD11P31277 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD11P31277 AL592182.3-201ENST00000642132 3304 ntBASIC5.58□□□□□ -1.52
HOXD11P31277 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD11P31277 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD11P31277 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD11P31277 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HOXD11P31277 Y_RNA.236-201ENST00000364427 111 ntBASIC5.58□□□□□ -1.52
HOXD11P31277 RNU6-132P-201ENST00000383863 107 ntBASIC5.58□□□□□ -1.52
HOXD11P31277 RNU6-154P-201ENST00000384306 106 ntBASIC5.58□□□□□ -1.52
HOXD11P31277 RNA5SP109-201ENST00000391010 116 ntBASIC5.58□□□□□ -1.52
HOXD11P31277 RNA5SP38-201ENST00000410750 119 ntBASIC5.58□□□□□ -1.52
HOXD11P31277 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXD11P31277 CYP2C59P-201ENST00000457790 269 ntBASIC5.58□□□□□ -1.52
HOXD11P31277 AC021678.3-201ENST00000517893 476 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms