Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.34□□□□□ -2.03
HOXA13P31271 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXA13P31271 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXA13P31271 MIR4273-201ENST00000582824 84 ntBASIC2.34□□□□□ -2.03
HOXA13P31271 AC022432.1-201ENST00000595739 310 ntBASIC2.34□□□□□ -2.03
HOXA13P31271 SNRPGP19-201ENST00000603826 189 ntBASIC2.34□□□□□ -2.03
HOXA13P31271 SNORD14A-201ENST00000606526 91 ntBASIC2.34□□□□□ -2.03
HOXA13P31271 AC009318.2-201ENST00000610917 651 ntBASIC2.34□□□□□ -2.03
HOXA13P31271 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.04
HOXA13P31271 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.34□□□□□ -2.04
HOXA13P31271 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXA13P31271 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.33□□□□□ -2.04
HOXA13P31271 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXA13P31271 ZNF271P-202ENST00000465539 1970 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 Y_RNA.5-201ENST00000362334 102 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 Y_RNA.187-201ENST00000363918 113 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 RNU6-1040P-201ENST00000383974 107 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 RNU6-1227P-201ENST00000383981 107 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 SNORA29-201ENST00000384183 140 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 RNU6-1093P-201ENST00000391194 107 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXA13P31271 USMG5P1-201ENST00000425964 177 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 AC079354.2-201ENST00000453523 154 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXA13P31271 CYCSP26-201ENST00000534107 320 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 CYP4A27P-201ENST00000567218 190 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 MIR5690-201ENST00000583739 73 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 MIR3171-201ENST00000584270 74 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 SNRPGP17-201ENST00000603780 214 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 PISRT1.1-201ENST00000616930 107 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 MIR7843-201ENST00000622274 79 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 uc_338.22-201ENST00000622722 187 ntBASIC2.33□□□□□ -2.04
HOXA13P31271 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXA13P31271 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HOXA13P31271 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HOXA13P31271 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HOXA13P31271 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXA13P31271 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXA13P31271 Y_RNA.146-201ENST00000363549 102 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 U3.9-201ENST00000363823 204 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 Y_RNA.326-201ENST00000365176 113 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 Y_RNA.431-201ENST00000384086 102 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 RNU6-378P-201ENST00000384324 107 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 MIR548P-201ENST00000408336 84 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 RNA5SP270-201ENST00000411361 118 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 CBX3P6-201ENST00000430257 527 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXA13P31271 AC022493.2-201ENST00000506122 481 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 HMGB3P3-201ENST00000510526 400 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 AC022616.8-201ENST00000533569 253 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXA13P31271 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 AL450472.1-202ENST00000637286 180 ntBASIC2.32□□□□□ -2.04
HOXA13P31271 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXA13P31271 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
HOXA13P31271 AC005336.3-201ENST00000623833 2679 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 RNU6-1159P-201ENST00000362933 107 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 SNORD115-3-201ENST00000363100 82 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 Y_RNA.197-201ENST00000364004 102 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 RNY3P11-201ENST00000364153 102 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 RNU6-1286P-201ENST00000383871 107 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 Y_RNA.395-201ENST00000383945 109 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 Y_RNA.445-201ENST00000384168 102 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 RNU1-148P-201ENST00000384472 162 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 SNORA26.3-201ENST00000391119 136 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXA13P31271 AL137792.2-201ENST00000443484 235 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXA13P31271 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.31□□□□□ -2.04
HOXA13P31271 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 RNU6-699P-201ENST00000517081 110 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HOXA13P31271 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 AC007485.1-201ENST00000616755 206 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.31□□□□□ -2.04
HOXA13P31271 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXA13P31271 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXA13P31271 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HOXA13P31271 AL356292.1-201ENST00000283110 373 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 Y_RNA.148-201ENST00000363557 117 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 Y_RNA.463-201ENST00000384271 102 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 RNU6-784P-201ENST00000384330 106 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 MIR1302-11-201ENST00000408051 138 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 MIR1302-9-201ENST00000408365 138 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 MIR1302-10-201ENST00000408734 138 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 MTCO3P29-201ENST00000432119 779 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXA13P31271 AL118496.2-201ENST00000448300 230 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXA13P31271 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXA13P31271 AC018868.1-201ENST00000491307 315 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AC105758.1-201ENST00000506038 399 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.3□□□□□ -2.04
HOXA13P31271 RNU6-1170P-201ENST00000515974 106 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 Y_RNA.661-201ENST00000516003 99 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 Y_RNA.711-201ENST00000516993 102 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms