Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SHC1P29353 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHC1P29353 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
SHC1P29353 RNU5B-2P-201ENST00000363036 113 ntBASIC2.01□□□□□ -2.09
SHC1P29353 RNU6-487P-201ENST00000365430 104 ntBASIC2.01□□□□□ -2.09
SHC1P29353 SNORD14.1-201ENST00000365609 90 ntBASIC2.01□□□□□ -2.09
SHC1P29353 RNU6-1222P-201ENST00000384615 107 ntBASIC2.01□□□□□ -2.09
SHC1P29353 MIR487A-201ENST00000385009 80 ntBASIC2.01□□□□□ -2.09
SHC1P29353 Y_RNA.592-201ENST00000410274 109 ntBASIC2.01□□□□□ -2.09
SHC1P29353 Z98742.3-201ENST00000418637 326 ntBASIC2.01□□□□□ -2.09
SHC1P29353 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.01□□□□□ -2.09
SHC1P29353 AL353705.4-201ENST00000449661 238 ntBASIC2.01□□□□□ -2.09
SHC1P29353 snoU13.30-201ENST00000458951 104 ntBASIC2.01□□□□□ -2.09
SHC1P29353 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.01□□□□□ -2.09
SHC1P29353 SNORA40.14-201ENST00000516543 86 ntBASIC2.01□□□□□ -2.09
SHC1P29353 AC144568.1-201ENST00000520139 137 ntBASIC2.01□□□□□ -2.09
SHC1P29353 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.01□□□□□ -2.09
SHC1P29353 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.01□□□□□ -2.09
SHC1P29353 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.01□□□□□ -2.09
SHC1P29353 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.01□□□□□ -2.09
SHC1P29353 AC007375.1-201ENST00000554513 578 ntBASIC2.01□□□□□ -2.09
SHC1P29353 AL078605.1-201ENST00000603529 500 ntBASIC2.01□□□□□ -2.09
SHC1P29353 AC124312.5-201ENST00000604451 268 ntBASIC2.01□□□□□ -2.09
SHC1P29353 AL356157.2-201ENST00000605122 111 ntBASIC2.01□□□□□ -2.09
SHC1P29353 AC013412.1-201ENST00000610687 192 ntBASIC2.01□□□□□ -2.09
SHC1P29353 AL159153.1-201ENST00000619688 317 ntBASIC2.01□□□□□ -2.09
SHC1P29353 AP000553.5-201ENST00000641933 54 ntBASIC2.01□□□□□ -2.09
SHC1P29353 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.01□□□□□ -2.09
SHC1P29353 HAUS6P2-201ENST00000433254 2404 ntBASIC2.01□□□□□ -2.09
SHC1P29353 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
SHC1P29353 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2□□□□□ -2.09
SHC1P29353 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2□□□□□ -2.09
SHC1P29353 Y_RNA.40-201ENST00000362645 93 ntBASIC2□□□□□ -2.09
SHC1P29353 Y_RNA.144-201ENST00000363521 113 ntBASIC2□□□□□ -2.09
SHC1P29353 RNU1-91P-201ENST00000364746 163 ntBASIC2□□□□□ -2.09
SHC1P29353 RNU4-9P-201ENST00000364951 139 ntBASIC2□□□□□ -2.09
SHC1P29353 Y_RNA.424-201ENST00000384063 103 ntBASIC2□□□□□ -2.09
SHC1P29353 RNU6-17P-201ENST00000384245 107 ntBASIC2□□□□□ -2.09
SHC1P29353 RNU6-18P-201ENST00000384527 107 ntBASIC2□□□□□ -2.09
SHC1P29353 RNU6-748P-201ENST00000384648 107 ntBASIC2□□□□□ -2.09
SHC1P29353 MIR32-201ENST00000384965 70 ntBASIC2□□□□□ -2.09
SHC1P29353 RNU6-220P-201ENST00000390919 107 ntBASIC2□□□□□ -2.09
SHC1P29353 RNU6-101P-201ENST00000410323 104 ntBASIC2□□□□□ -2.09
SHC1P29353 RN7SKP61-201ENST00000410642 295 ntBASIC2□□□□□ -2.09
SHC1P29353 AC007064.1-201ENST00000412238 351 ntBASIC2□□□□□ -2.09
SHC1P29353 AC078809.1-201ENST00000427601 140 ntBASIC2□□□□□ -2.09
SHC1P29353 AC244670.1-201ENST00000436879 112 ntBASIC2□□□□□ -2.09
SHC1P29353 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2□□□□□ -2.09
SHC1P29353 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2□□□□□ -2.09
SHC1P29353 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2□□□□□ -2.09
SHC1P29353 AC012308.1-201ENST00000451232 178 ntBASIC2□□□□□ -2.09
SHC1P29353 AC087477.1-201ENST00000465747 340 ntBASIC2□□□□□ -2.09
SHC1P29353 AC010655.3-201ENST00000478818 450 ntBASIC2□□□□□ -2.09
SHC1P29353 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2□□□□□ -2.09
SHC1P29353 SNORA31.6-201ENST00000516241 130 ntBASIC2□□□□□ -2.09
SHC1P29353 SNORA31.16-201ENST00000516773 139 ntBASIC2□□□□□ -2.09
SHC1P29353 AC040926.1-201ENST00000530195 238 ntBASIC2□□□□□ -2.09
SHC1P29353 MIR5571-201ENST00000577998 113 ntBASIC2□□□□□ -2.09
SHC1P29353 VN1R91P-201ENST00000594377 169 ntBASIC2□□□□□ -2.09
SHC1P29353 U2.1-201ENST00000618978 145 ntBASIC2□□□□□ -2.09
SHC1P29353 AC064859.1-201ENST00000624741 174 ntBASIC2□□□□□ -2.09
SHC1P29353 SCARNA4-201ENST00000629045 128 ntBASIC2□□□□□ -2.09
SHC1P29353 MIR203B-201ENST00000636080 86 ntBASIC2□□□□□ -2.09
SHC1P29353 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
SHC1P29353 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SHC1P29353 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
SHC1P29353 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHC1P29353 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHC1P29353 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.99□□□□□ -2.09
SHC1P29353 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.99□□□□□ -2.09
SHC1P29353 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHC1P29353 Y_RNA.47-201ENST00000362697 108 ntBASIC1.99□□□□□ -2.09
SHC1P29353 SNORA38-201ENST00000363946 132 ntBASIC1.99□□□□□ -2.09
SHC1P29353 U3.13-201ENST00000364804 214 ntBASIC1.99□□□□□ -2.09
SHC1P29353 U8.10-201ENST00000384260 133 ntBASIC1.99□□□□□ -2.09
SHC1P29353 Y_RNA.512-201ENST00000384518 102 ntBASIC1.99□□□□□ -2.09
SHC1P29353 MTCYBP2-201ENST00000407745 171 ntBASIC1.99□□□□□ -2.09
SHC1P29353 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.99□□□□□ -2.09
SHC1P29353 EIF1AXP1-201ENST00000419267 435 ntBASIC1.99□□□□□ -2.09
SHC1P29353 DPH3P2-201ENST00000422618 250 ntBASIC1.99□□□□□ -2.09
SHC1P29353 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHC1P29353 GPM6BP3-201ENST00000442797 145 ntBASIC1.99□□□□□ -2.09
SHC1P29353 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.99□□□□□ -2.09
SHC1P29353 RNU7-87P-201ENST00000459343 62 ntBASIC1.99□□□□□ -2.09
SHC1P29353 AP001324.2-201ENST00000461163 319 ntBASIC1.99□□□□□ -2.09
SHC1P29353 TRBV12-1-201ENST00000479785 344 ntBASIC1.99□□□□□ -2.09
SHC1P29353 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.99□□□□□ -2.09
SHC1P29353 AC093852.1-201ENST00000503587 266 ntBASIC1.99□□□□□ -2.09
SHC1P29353 ANXA2P1-201ENST00000505539 926 ntBASIC1.99□□□□□ -2.09
SHC1P29353 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.99□□□□□ -2.09
SHC1P29353 Y_RNA.721-201ENST00000517207 102 ntBASIC1.99□□□□□ -2.09
SHC1P29353 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.99□□□□□ -2.09
SHC1P29353 AC022616.4-201ENST00000522985 181 ntBASIC1.99□□□□□ -2.09
SHC1P29353 MIR3945-201ENST00000581853 98 ntBASIC1.99□□□□□ -2.09
SHC1P29353 MIR4503-201ENST00000582187 83 ntBASIC1.99□□□□□ -2.09
SHC1P29353 MIR3199-1-201ENST00000582434 88 ntBASIC1.99□□□□□ -2.09
SHC1P29353 RPS15AP11-201ENST00000594193 385 ntBASIC1.99□□□□□ -2.09
SHC1P29353 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.99□□□□□ -2.09
SHC1P29353 AC016727.2-201ENST00000603988 621 ntBASIC1.99□□□□□ -2.09
SHC1P29353 AC100812.1-201ENST00000607622 580 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms